C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156108 Sema4a-016 ENSMUSG00000028064 10090 - 3:88435962-88441139 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartMuscleOvaryENSMUST00000156108
Transcript ID Adipose Adrenal Breast Heart Muscle Ovary
ENSMUST00000156108 7.378±2.71 12.219±3.36 15.780±2.08 0.619±0.16 0.295±0.07 4.124±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355014 SEMA4A-002 protein_coding Homo_sapiens 3e-33 148
ENST00000368282 SEMA4A-003 protein_coding Homo_sapiens 3e-33 148
ENST00000368284 SEMA4A-004 protein_coding Homo_sapiens 2e-33 148
ENST00000368285 SEMA4A-001 protein_coding Homo_sapiens 3e-33 148
ENST00000368286 SEMA4A-201 protein_coding Homo_sapiens 3e-33 148

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