| Transcript ID | Brain | Breast | Ovary | Testis |
|---|---|---|---|---|
| ENST00000368282 | 0.778±0.00 | 0.952±0.00 | 1.167±0.56 | 0.762±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000368282  |
SEMA4A-003 |
ENSG00000196189 |
9606 | + |
1:156154371-156177752  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000898 | CIL_000898_0001 | VISTA | 1:155789635-156392759 |
| CIL_0008P5 | CIL_0008P5_0001 | VISTA | 1:155795688-156399252 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001525 | IEA | angiogenesis |
| GO:0004872 | IEA | receptor activity |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005886 | TAS | plasma membrane |
| GO:0007275 | IEA | multicellular organismal development |
| GO:0007411 | TAS | axon guidance |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000169222
|
Sema4a-203 | protein_coding | Mus_musculus | 0 | 2193 |
|
ENSMUST00000165898
|
Sema4a-201 | protein_coding | Mus_musculus | 0 | 2193 |
|
ENSMUST00000166237
|
Sema4a-202 | protein_coding | Mus_musculus | 0 | 2193 |
|
ENSMUST00000029700
|
Sema4a-001 | protein_coding | Mus_musculus | 0 | 2193 |
|
ENSMUST00000107531
|
Sema4a-002 | protein_coding | Mus_musculus | 0 | 1768 |
|
ENSMUST00000149145
|
Sema4a-014 | retained_intron | Mus_musculus | 0 | 1389 |
|
ENSMUST00000184487
|
Sema4a-008 | nonsense_mediated_decay | Mus_musculus | 0 | 697 |
|
ENSMUST00000127436
|
Sema4a-004 | protein_coding | Mus_musculus | 0 | 689 |
|
ENSMUST00000147200
|
Sema4a-005 | protein_coding | Mus_musculus | 0 | 595 |
|
ENSMUST00000185137
|
Sema4a-007 | nonsense_mediated_decay | Mus_musculus | 0 | 486 |
|
ENSMUST00000184876
|
Sema4a-009 | nonsense_mediated_decay | Mus_musculus | 0 | 425 |
|
ENSMUST00000135732
|
Sema4a-006 | retained_intron | Mus_musculus | 0 | 425 |
|
ENSMUST00000135539
|
Sema4a-015 | retained_intron | Mus_musculus | 3e-33 | 148 |
|
ENSMUST00000156108
|
Sema4a-016 | retained_intron | Mus_musculus | 3e-33 | 148 |
