C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156394 Snf8-006 ENSMUSG00000006058 10090 + 11:96044824-96047319 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungENSMUST00000156394
Transcript ID Breast Lung
ENSMUST00000156394 1.948±0.00 2.943±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0002 VISTA 11:95992065-96592579

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290330 SNF8-002 protein_coding Homo_sapiens 0 425
ENST00000502492 SNF8-001 protein_coding Homo_sapiens 0 438
ENST00000504000 SNF8-003 retained_intron Homo_sapiens 0 257
ENST00000509989 SNF8-011 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000509995 SNF8-008 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000510558 SNF8-006 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000514089 SNF8-015 processed_transcript Homo_sapiens 0 442
ENST00000515572 SNF8-012 retained_intron Homo_sapiens 0 473
ENST00000573795 SNF8-017 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000576353 SNF8-016 nonsense_mediated_decay Homo_sapiens 0 416

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