C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SNF8, ESCRT-II complex subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504000 SNF8-003 ENSG00000159210 9606 - 17:48930390-48933318 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLungOvaryTestisENST00000504000
Transcript ID Adrenal Brain Breast Heart Kidney Lung Ovary Testis
ENST00000504000 5.314±0.00 3.296±0.00 1.211±0.00 0.846±0.00 5.753±0.00 1.938±0.81 3.885±1.29 5.661±1.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006217 Snf8-001 protein_coding Mus_musculus 0 307
ENSMUST00000156394 Snf8-006 processed_transcript Mus_musculus 0 257
ENSMUST00000145749 Snf8-002 processed_transcript Mus_musculus 0 211
ENSMUST00000107700 Snf8-005 protein_coding Mus_musculus 0 211
ENSMUST00000077549 Prss43-201 protein_coding Mus_musculus 0.000000000002 79

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