C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: oligophrenin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156634 Ophn1-003 ENSMUSG00000031214 10090 - X:98887780-98890625 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000156634
Transcript ID Liver
ENSMUST00000156634 0.096±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SR CIL_0001SR_0003 CGP X:98149721-98891025
CIL_0001SQ CIL_0001SQ_0003 CGP X:98554277-98949017

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336498 ARHGAP10-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000355520 OPHN1-001 protein_coding Homo_sapiens 0 231
ENST00000491714 OPHN1-005 processed_transcript Homo_sapiens 1e-28 130
ENST00000510379 ARHGAP10-002 retained_intron Homo_sapiens 0.0000000000005 81

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