C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001SR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000067976-ENSDARG00000035420 CGP 7955 5:37179505-37361639
GeneTranscriptPositionBiotype
ENSDARG00000035420 (ophn1)
oligophrenin 1 		ENSDART00000046157 (ophn1-201) 37300581-37361639 protein_coding
ENSDART00000123562 (ophn1-001) 37301595-37361639 protein_coding
ENSDART00000144654 (ophn1-002) 37343445-37346125 retained_intron
ENSDARG00000067976 (ar)
androgen receptor 		ENSDART00000098022 (ar-001) 37179505-37297038 protein_coding
ENSDART00000125329 (ar-201) 37179601-37296564 protein_coding
CIL_0001SR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169083-ENSG00000079482 CGP 9606 X:67544032-68433913
GeneTranscriptPositionBiotype
ENSG00000079482 (OPHN1)
oligophrenin 1 		ENST00000355520 (OPHN1-001) 68042344-68433805 protein_coding
ENST00000467444 (OPHN1-002) 68192742-68210268 processed_transcript
ENST00000484842 (OPHN1-004) 68063854-68112422 processed_transcript
ENST00000486068 (OPHN1-003) 68299001-68336452 processed_transcript
ENST00000491714 (OPHN1-005) 68432931-68433913 processed_transcript
ENSG00000169083 (AR)
androgen receptor 		ENST00000374690 (AR-001) 67544623-67730619 protein_coding
ENST00000396043 (AR-002) 67568889-67724288 protein_coding
ENST00000396044 (AR-201) 67544032-67730618 protein_coding
ENST00000504326 (AR-004) 67544820-67696075 protein_coding
ENST00000513847 (AR-003) 67544820-67689763 processed_transcript
ENST00000514029 (AR-005) 67544820-67696075 nonsense_mediated_decay
ENST00000612010 (AR-202) 67544820-67696075 protein_coding
ENST00000612452 (AR-203) 67544032-67730618 protein_coding
ENST00000613054 (AR-204) 67544820-67696075 protein_coding
ENSG00000228125 (AKIRIN1P2)
akirin 1 pseudogene 2 		ENST00000440655 (AKIRIN1P2-001) 68132868-68133437 processed_pseudogene
ENSG00000228328 (RP11-516A11.1)
 ENST00000426382 (RP11-516A11.1-001) 68070520-68071767 processed_pseudogene
ENSG00000234201 (RP11-383C12.2)
 ENST00000445879 (RP11-383C12.2-001) 67791955-67792895 processed_pseudogene
ENSG00000260118 (RP6-201G10.2)
 ENST00000561973 (RP6-201G10.2-001) 68013470-68014901 lincRNA
CIL_0001SR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046532-ENSMUSG00000031214 CGP 10090 X:98149721-98891025
GeneTranscriptPositionBiotype
ENSMUSG00000031214 (Ophn1)
oligophrenin 1 		ENSMUST00000033560 (Ophn1-001) 98554277-98890985 protein_coding
ENSMUST00000113826 (Ophn1-004) 98558251-98890781 protein_coding
ENSMUST00000125150 (Ophn1-005) 98712199-98891025 retained_intron
ENSMUST00000140598 (Ophn1-008) 98873726-98890384 processed_transcript
ENSMUST00000142267 (Ophn1-002) 98732392-98890985 protein_coding
ENSMUST00000147529 (Ophn1-009) 98558257-98578489 protein_coding
ENSMUST00000147805 (Ophn1-006) 98712427-98890985 retained_intron
ENSMUST00000154920 (Ophn1-010) 98563569-98578435 processed_transcript
ENSMUST00000156634 (Ophn1-003) 98887780-98890625 retained_intron
ENSMUST00000156917 (Ophn1-007) 98801801-98890609 retained_intron
ENSMUSG00000046532 (Ar)
androgen receptor 		ENSMUST00000052837 (Ar-001) 98149721-98323215 protein_coding
ENSMUSG00000081397 (Gm14815)
predicted gene 14815 		ENSMUST00000120060 (Gm14815-001) 98513900-98514387 processed_pseudogene
ENSMUSG00000083603 (Gm14810)
predicted gene 14810 		ENSMUST00000121628 (Gm14810-001) 98544397-98544882 processed_pseudogene
ENSMUSG00000099037 (Gm27554)
predicted gene, 27554 		ENSMUST00000185074 (Gm27554-201) 98727315-98727412 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SR_0001ENSDARG00000035420ENSDART00000046157ENSDART00000123562ENSDART00000144654ENSDARG00000067976ENSDART00000098022ENSDART00000125329CIL_0001SR_0002ENSG00000079482ENST00000355520ENST00000467444ENST00000484842ENST00000486068ENST00000491714ENSG00000169083ENST00000374690ENST00000396043ENST00000396044ENST00000504326ENST00000513847ENST00000514029ENST00000612010ENST00000612452ENST00000613054ENSG00000228125ENST00000440655ENSG00000228328ENST00000426382ENSG00000234201ENST00000445879ENSG00000260118ENST00000561973CIL_0001SR_0003ENSMUSG00000031214ENSMUST00000033560ENSMUST00000113826ENSMUST00000125150ENSMUST00000140598ENSMUST00000142267ENSMUST00000147529ENSMUST00000147805ENSMUST00000154920ENSMUST00000156634ENSMUST00000156917ENSMUSG00000046532ENSMUST00000052837ENSMUSG00000081397ENSMUST00000120060ENSMUSG00000083603ENSMUST00000121628ENSMUSG00000099037ENSMUST00000185074
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SR_0001ENSDARG00000035420ENSDART00000046157ENSDART00000123562ENSDART00000144654ENSDARG00000067976ENSDART00000098022ENSDART00000125329CIL_0001SR_0002ENSG00000079482ENST00000355520ENSG00000169083ENST00000374690ENST00000396043ENST00000396044ENST00000513847ENST00000612452ENSG00000228125ENST00000440655ENSG00000228328ENST00000426382ENSG00000234201ENST00000445879ENSG00000260118ENST00000561973CIL_0001SR_0003ENSMUSG00000031214ENSMUST00000033560ENSMUST00000113826ENSMUST00000125150ENSMUST00000142267ENSMUST00000147805ENSMUST00000156634ENSMUST00000156917ENSMUSG00000046532ENSMUST00000052837ENSMUSG00000081397ENSMUST00000120060ENSMUSG00000083603ENSMUST00000121628ENSMUSG00000099037ENSMUST00000185074
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035420 ENSDART00000046157 N/A N/A N/A N/A N/A N/A 1.482±0.00 8.089±0.20 N/A N/A N/A N/A N/A N/A
ENSDART00000123562 N/A N/A N/A 0.660±0.15 N/A N/A 0.882±0.23 N/A N/A N/A 0.696±0.00 N/A N/A N/A
ENSDART00000144654 N/A N/A N/A N/A N/A N/A 0.884±0.56 3.294±0.45 N/A N/A N/A N/A N/A N/A
ENSDARG00000067976 ENSDART00000098022 N/A N/A N/A 1.981±0.00 N/A N/A N/A N/A 3.162±0.00 N/A N/A N/A N/A N/A
ENSDART00000125329 N/A N/A N/A 0.760±0.00 N/A N/A N/A N/A 1.870±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079482 ENST00000355520 0.813±0.00 1.054±0.00 1.339±0.00 3.224±0.45 1.462±0.45 1.424±0.95 0.678±0.12 1.036±0.00 1.052±0.90 1.212±0.00 0.407±0.00 1.044±0.68 1.396±1.01 1.370±0.38
ENST00000467444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169083 ENST00000374690 1.386±0.00 N/A 0.473±0.00 0.097±0.00 1.338±1.08 0.388±0.00 0.804±0.19 11.807±0.00 2.267±1.09 0.559±0.21 0.989±0.00 2.127±1.43 0.187±0.00 2.038±0.48
ENST00000396043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.530±0.00 N/A N/A N/A
ENST00000396044 N/A 0.112±0.00 N/A N/A N/A N/A N/A 0.818±0.00 N/A N/A 0.797±0.00 N/A 0.054±0.02 N/A
ENST00000504326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A
ENST00000514029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612452 0.947±0.00 N/A 0.669±0.00 0.080±0.00 0.808±0.00 0.315±0.00 0.734±0.00 3.953±0.00 0.565±0.00 0.112±0.00 N/A 0.811±0.00 N/A 1.165±0.00
ENST00000613054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228125 ENST00000440655 N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A
ENSG00000228328 ENST00000426382 0.166±0.00 0.047±0.00 0.165±0.00 0.111±0.04 0.413±0.00 0.054±0.00 0.042±0.02 0.059±0.00 0.067±0.01 0.656±0.00 0.041±0.00 0.070±0.05 0.028±0.01 0.074±0.00
ENSG00000234201 ENST00000445879 N/A N/A N/A 0.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260118 ENST00000561973 0.076±0.00 0.281±0.00 0.056±0.00 0.385±0.26 0.389±0.02 0.005±0.00 0.042±0.02 0.243±0.00 0.018±0.00 0.090±0.00 N/A 0.177±0.07 0.044±0.02 0.043±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031214 ENSMUST00000033560 1.545±0.46 N/A 1.149±0.08 4.049±0.28 1.376±0.21 0.708±0.20 0.213±0.00 0.389±0.15 0.167±0.08 0.873±0.23 0.221±0.09 0.803±0.31 0.137±0.07 N/A
ENSMUST00000113826 2.585±0.75 N/A 2.695±0.04 3.923±0.83 1.422±0.15 0.761±0.17 0.713±0.14 0.359±0.11 0.328±0.16 0.578±0.05 0.652±0.17 3.198±1.44 0.521±0.21 3.671±0.42
ENSMUST00000125150 N/A 0.621±0.07 N/A N/A N/A N/A N/A N/A 0.064±0.01 N/A N/A 0.706±0.00 N/A N/A
ENSMUST00000140598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142267 3.964±0.48 1.855±0.39 N/A N/A 4.543±0.79 4.342±0.58 N/A 0.963±0.26 0.266±0.09 3.239±1.12 N/A 5.345±1.25 N/A N/A
ENSMUST00000147529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147805 N/A N/A N/A N/A N/A N/A 0.434±0.00 N/A 0.060±0.00 N/A N/A 1.027±0.00 N/A N/A
ENSMUST00000154920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156634 N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.02 N/A N/A N/A N/A N/A
ENSMUST00000156917 N/A 3.453±1.43 N/A N/A 5.572±0.44 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046532 ENSMUST00000052837 4.529±2.41 10.256±3.32 1.244±1.04 0.648±0.89 1.732±0.42 0.158±0.02 0.332±0.02 2.635±0.26 0.221±0.18 0.852±0.07 3.705±1.09 5.439±2.67 0.118±0.24 0.423±0.15
ENSMUSG00000081397 ENSMUST00000120060 N/A N/A 0.033±0.01 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083603 ENSMUST00000121628 0.314±0.00 N/A 0.131±0.08 0.462±0.00 0.197±0.08 N/A N/A 0.100±0.00 0.066±0.04 0.220±0.07 0.081±0.00 1.029±0.19 0.038±0.02 N/A
ENSMUSG00000099037 ENSMUST00000185074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.574±0.00

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