C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box G1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156952 Foxg1-004 ENSMUSG00000020950 10090 + 12:49382883-49386854 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungOvaryTestisENSMUST00000156952
Transcript ID Brain Liver Lung Ovary Testis
ENSMUST00000156952 4.590±2.08 0.050±0.05 0.005±0.00 0.004±0.00 0.028±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095I CIL_00095I_0002 VISTA 12:49074505-49676068
CIL_0008Y3 CIL_0008Y3_0002 VISTA 12:49210396-49811504
CIL_0007MH CIL_0007MH_0002 UCNEbase 12:49381405-50295756

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306268 FOXI1-001 protein_coding Homo_sapiens 3e-25 121
ENST00000313071 FOXG1-001 protein_coding Homo_sapiens 0 3814
ENST00000388920 FOXI2-001 protein_coding Homo_sapiens 1e-21 110
ENST00000428390 FOXI3-001 protein_coding Homo_sapiens 5e-20 104
ENST00000449804 FOXI1-002 protein_coding Homo_sapiens 1e-19 102
ENST00000506382 WI2-2373I1.1-001 processed_pseudogene Homo_sapiens 2e-23 111

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