C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: suppressor of cancer cell invasion
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000157038 Scai-003 ENSMUSG00000035236 10090 - 2:39103482-39190730 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryPlacentaENSMUST00000157038
Transcript ID Adrenal Colon Ovary Placenta
ENSMUST00000157038 0.257±0.00 0.307±0.00 1.000±0.49 0.302±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075F CIL_00075F_0002 CGP 2:39016261-39190730
CIL_00075C CIL_00075C_0002 CGP 2:39066214-39226451

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336505 SCAI-001 protein_coding Homo_sapiens 0 1430
ENST00000373549 SCAI-003 protein_coding Homo_sapiens 0 1173
ENST00000468569 SCAI-005 retained_intron Homo_sapiens 0 272
ENST00000477186 SCAI-004 nonsense_mediated_decay Homo_sapiens 0 1413

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