C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | upstream transcription factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000159207  |
Usf1-004 |
ENSMUSG00000026641 |
10090 | + |
1:171411313-171416977  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00026D | CIL_00026D_0002 | CGP | 1:171411313-171464603 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IDA | DNA binding |
| GO:0003700 | IDA | sequence-specific DNA binding transcription factor activity |
| GO:0005667 | IC | transcription factor complex |
| GO:0045893 | IDA | positive regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000368019
|
USF1-003 | protein_coding | Homo_sapiens | 0 | 643 |
|
ENST00000368020
|
USF1-002 | protein_coding | Homo_sapiens | 0 | 719 |
|
ENST00000368021
|
USF1-001 | protein_coding | Homo_sapiens | 0 | 717 |
|
ENST00000473969
|
USF1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 305 |
|
ENST00000491629
|
USF1-007 | retained_intron | Homo_sapiens | 0 | 717 |
|
ENST00000496363
|
USF1-006 | retained_intron | Homo_sapiens | 0 | 717 |
|
ENST00000529476
|
USF1-010 | retained_intron | Homo_sapiens | 0 | 364 |
|
ENST00000531842
|
USF1-011 | protein_coding | Homo_sapiens | 0 | 501 |
|
ENST00000534633
|
USF1-008 | protein_coding | Homo_sapiens | 0 | 647 |
