C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014463-ENSDARG00000068114 CGP 7955 5:31441870-31464336
GeneTranscriptPositionBiotype
ENSDARG00000014463 (usf1l)
upstream transcription factor 1, like 		ENSDART00000005263 (usf1l-001) 31441870-31456338 protein_coding
ENSDART00000134900 (usf1l-005) 31442020-31450458 protein_coding
ENSDART00000137558 (usf1l-004) 31441912-31451080 protein_coding
ENSDART00000143770 (usf1l-002) 31441901-31451102 processed_transcript
ENSDART00000146963 (usf1l-003) 31441918-31450801 protein_coding
ENSDART00000147569 (usf1l-006) 31442192-31450801 protein_coding
ENSDARG00000068114 (f11rl)
F11 receptor, like 		ENSDART00000098315 (f11rl-201) 31458756-31464336 protein_coding
ENSDART00000146331 (f11rl-001) 31458756-31461730 protein_coding
CIL_00026D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026641-ENSMUSG00000038235 CGP 10090 1:171411313-171464603
GeneTranscriptPositionBiotype
ENSMUSG00000026641 (Usf1)
upstream transcription factor 1 		ENSMUST00000001284 (Usf1-003) 171411313-171418121 nonsense_mediated_decay
ENSMUST00000159207 (Usf1-004) 171411313-171416977 protein_coding
ENSMUST00000159371 (Usf1-007) 171417460-171418431 retained_intron
ENSMUST00000159466 (Usf1-005) 171411374-171415613 retained_intron
ENSMUST00000159929 (Usf1-008) 171417330-171417930 retained_intron
ENSMUST00000160335 (Usf1-009) 171411334-171417356 retained_intron
ENSMUST00000160486 (Usf1-002) 171411384-171418757 protein_coding
ENSMUST00000161241 (Usf1-001) 171411313-171419142 protein_coding
ENSMUST00000161297 (Usf1-006) 171411326-171415737 processed_transcript
ENSMUST00000167546 (Usf1-201) 171411681-171418743 protein_coding
ENSMUST00000171362 (Usf1-202) 171419033-171420352 protein_coding
ENSMUSG00000038235 (F11r)
F11 receptor 		ENSMUST00000043839 (F11r-001) 171437535-171464603 protein_coding
ENSMUST00000144497 (F11r-002) 171437579-171460846 retained_intron
ENSMUST00000155913 (F11r-003) 171462850-171463645 processed_transcript
ENSMUSG00000097045 (Gm26641)
predicted gene, 26641 		ENSMUST00000181499 (Gm26641-201) 171423185-171437318 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026D_0001ENSDARG00000014463ENSDART00000005263ENSDART00000134900ENSDART00000137558ENSDART00000143770ENSDART00000146963ENSDART00000147569ENSDARG00000068114ENSDART00000098315ENSDART00000146331CIL_00026D_0002ENSMUSG00000026641ENSMUST00000001284ENSMUST00000159207ENSMUST00000159371ENSMUST00000159466ENSMUST00000159929ENSMUST00000160335ENSMUST00000160486ENSMUST00000161241ENSMUST00000161297ENSMUST00000167546ENSMUST00000171362ENSMUSG00000038235ENSMUST00000043839ENSMUST00000144497ENSMUST00000155913ENSMUSG00000097045ENSMUST00000181499
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026D_0001ENSDARG00000014463ENSDART00000005263ENSDART00000137558ENSDART00000143770ENSDART00000146963ENSDARG00000068114ENSDART00000098315ENSDART00000146331CIL_00026D_0002ENSMUSG00000026641ENSMUST00000001284ENSMUST00000159371ENSMUST00000160335ENSMUST00000160486ENSMUST00000161241ENSMUST00000167546ENSMUST00000171362ENSMUSG00000038235ENSMUST00000043839ENSMUST00000155913ENSMUSG00000097045ENSMUST00000181499
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014463 ENSDART00000005263 N/A N/A N/A 9.033±1.00 N/A N/A 19.842±9.76 8.658±2.66 N/A N/A 9.959±0.00 N/A N/A N/A
ENSDART00000134900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137558 N/A N/A N/A N/A N/A N/A N/A N/A 1.114±0.00 N/A N/A N/A N/A N/A
ENSDART00000143770 N/A N/A N/A N/A N/A N/A 13.840±0.00 N/A 0.419±0.00 N/A N/A N/A N/A N/A
ENSDART00000146963 N/A N/A N/A 4.907±0.05 N/A N/A 11.472±1.78 N/A N/A N/A 3.975±0.00 N/A N/A N/A
ENSDART00000147569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000068114 ENSDART00000098315 N/A N/A N/A 0.035±0.00 N/A N/A 0.606±0.27 6.853±0.79 0.202±0.00 N/A 0.121±0.00 N/A N/A N/A
ENSDART00000146331 N/A N/A N/A 0.120±0.02 N/A N/A N/A N/A 0.713±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026641 ENSMUST00000001284 8.883±2.38 12.541±2.43 6.189±0.40 N/A 11.897±0.88 N/A 3.763±0.55 7.146±0.71 4.888±1.38 13.639±1.35 N/A 16.028±3.70 6.251±1.16 2.635±0.31
ENSMUST00000159207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159371 N/A N/A 10.298±0.00 31.832±9.40 N/A N/A 4.337±0.32 N/A 5.511±0.89 N/A N/A 9.570±0.00 12.362±0.92 2.620±1.19
ENSMUST00000159466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160335 14.915±3.20 23.410±3.42 9.326±0.60 47.110±1.39 17.707±4.81 N/A 8.509±0.40 13.926±0.68 8.296±2.14 24.864±3.71 5.216±0.29 38.856±8.08 12.724±0.00 3.844±0.94
ENSMUST00000160486 N/A 4.678±0.00 N/A N/A 7.708±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.328±0.07
ENSMUST00000161241 N/A N/A 3.590±0.00 N/A N/A N/A N/A N/A 2.037±0.60 N/A N/A 6.961±1.84 3.754±1.66 N/A
ENSMUST00000161297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167546 13.365±2.71 10.761±2.95 10.547±0.68 24.999±7.23 9.469±3.67 19.632±2.05 5.785±2.15 10.048±1.09 5.466±0.83 15.534±0.37 7.207±1.50 19.263±3.75 12.451±2.51 2.932±1.30
ENSMUST00000171362 N/A N/A N/A N/A N/A 321.283±10.41 N/A 45.328±2.92 33.222±3.84 N/A N/A N/A N/A N/A
ENSMUSG00000038235 ENSMUST00000043839 25.642±8.89 18.200±4.63 21.518±0.75 1.655±0.45 17.146±10.35 72.721±34.09 14.776±6.71 33.252±12.18 22.676±10.10 52.269±24.64 3.165±0.33 40.184±9.68 34.277±7.40 11.743±4.79
ENSMUST00000144497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155913 N/A N/A N/A N/A 12.204±1.84 N/A 14.340±0.00 28.258±0.26 N/A N/A N/A N/A N/A N/A
ENSMUSG00000097045 ENSMUST00000181499 0.127±0.03 N/A 0.064±0.03 0.126±0.05 0.113±0.05 0.150±0.06 0.051±0.02 0.345±0.16 0.168±0.12 0.212±0.08 0.068±0.04 0.191±0.03 0.125±0.09 0.141±0.07

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