C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: upstream transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496363 USF1-006 ENSG00000158773 9606 - 1:161040440-161045912 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENST00000496363
Transcript ID Liver Ovary
ENST00000496363 1.765±0.00 2.951±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160486 Usf1-002 protein_coding Mus_musculus 0 1090
ENSMUST00000161241 Usf1-001 protein_coding Mus_musculus 0 1090
ENSMUST00000167546 Usf1-201 protein_coding Mus_musculus 0 1074
ENSMUST00000160335 Usf1-009 retained_intron Mus_musculus 0 885
ENSMUST00000159207 Usf1-004 protein_coding Mus_musculus 0 717
ENSMUST00000001284 Usf1-003 nonsense_mediated_decay Mus_musculus 0 715
ENSMUST00000119288 Gm12345-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000159466 Usf1-005 retained_intron Mus_musculus 0 211
ENSMUST00000159371 Usf1-007 retained_intron Mus_musculus 0 207
ENSMUST00000159929 Usf1-008 retained_intron Mus_musculus 0 207
ENSMUST00000161297 Usf1-006 processed_transcript Mus_musculus 0 206

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