C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: upstream transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529476 USF1-010 ENSG00000158773 9606 - 1:161041607-161045939 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverENST00000529476
Transcript ID Brain Breast Colon Liver
ENST00000529476 5.572±0.00 1.952±0.00 7.397±0.00 4.353±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160335 Usf1-009 retained_intron Mus_musculus 0 403
ENSMUST00000161241 Usf1-001 protein_coding Mus_musculus 0 403
ENSMUST00000160486 Usf1-002 protein_coding Mus_musculus 0 381
ENSMUST00000167546 Usf1-201 protein_coding Mus_musculus 0 364
ENSMUST00000159207 Usf1-004 protein_coding Mus_musculus 0 364
ENSMUST00000001284 Usf1-003 nonsense_mediated_decay Mus_musculus 0 344
ENSMUST00000161297 Usf1-006 processed_transcript Mus_musculus 0 228
ENSMUST00000159466 Usf1-005 retained_intron Mus_musculus 0 211

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