C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: upstream transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159371 Usf1-007 ENSMUSG00000026641 10090 + 1:171417460-171418431 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverOvaryPlacentaTestisENSMUST00000159371
Transcript ID Bladder Brain Heart Liver Ovary Placenta Testis
ENSMUST00000159371 10.298±0.00 31.832±9.40 4.337±0.32 5.511±0.89 9.570±0.00 12.362±0.92 2.620±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026D CIL_00026D_0002 CGP 1:171411313-171464603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368019 USF1-003 protein_coding Homo_sapiens 0 525
ENST00000368020 USF1-002 protein_coding Homo_sapiens 0 704
ENST00000368021 USF1-001 protein_coding Homo_sapiens 0 704
ENST00000472217 USF1-005 retained_intron Homo_sapiens 0 503
ENST00000473969 USF1-004 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000496363 USF1-006 retained_intron Homo_sapiens 0 207
ENST00000528768 USF1-009 protein_coding Homo_sapiens 0 379
ENST00000531842 USF1-011 protein_coding Homo_sapiens 0 333

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