C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00038S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163697-ENSG00000154277 CGP 9606 4:40810027-41268455
GeneTranscriptPositionBiotype
ENSG00000154277 (UCHL1)
ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 		ENST00000284440 (UCHL1-001) 41256833-41268429 protein_coding
ENST00000381760 (UCHL1-003) 41256908-41268428 retained_intron
ENST00000472501 (UCHL1-004) 41256946-41268427 retained_intron
ENST00000503431 (UCHL1-005) 41256769-41268256 protein_coding
ENST00000504818 (UCHL1-011) 41256933-41261923 processed_transcript
ENST00000505232 (UCHL1-010) 41256932-41268108 nonsense_mediated_decay
ENST00000508768 (UCHL1-009) 41256940-41268239 protein_coding
ENST00000510566 (UCHL1-008) 41261739-41264465 retained_intron
ENST00000512419 (UCHL1-002) 41256911-41268455 nonsense_mediated_decay
ENST00000512788 (UCHL1-012) 41256945-41268125 protein_coding
ENST00000514764 (UCHL1-006) 41260639-41268429 retained_intron
ENST00000514924 (UCHL1-007) 41256413-41257737 protein_coding
ENSG00000163697 (APBB2)
amyloid beta (A4) precursor protein-binding, family B, member 2 		ENST00000295974 (APBB2-002) 40810027-41214618 protein_coding
ENST00000502682 (APBB2-009) 41065669-41216714 processed_transcript
ENST00000502687 (APBB2-031) 40815973-40822466 retained_intron
ENST00000502841 (APBB2-007) 40815333-40857155 protein_coding
ENST00000503264 (APBB2-019) 41014288-41214518 protein_coding
ENST00000503503 (APBB2-016) 41014388-41214485 protein_coding
ENST00000503555 (APBB2-011) 41065590-41207908 processed_transcript
ENST00000504305 (APBB2-025) 40815746-40857155 protein_coding
ENST00000504484 (APBB2-008) 40892395-40935626 retained_intron
ENST00000505266 (APBB2-013) 41193793-41214497 processed_transcript
ENST00000506352 (APBB2-012) 40815617-41214615 protein_coding
ENST00000506999 (APBB2-015) 41033290-41214569 processed_transcript
ENST00000507831 (APBB2-024) 40823666-40890914 processed_transcript
ENST00000508593 (APBB2-003) 40815324-41214532 protein_coding
ENST00000508676 (APBB2-010) 41014336-41214608 protein_coding
ENST00000508707 (APBB2-018) 41014213-41214520 protein_coding
ENST00000509446 (APBB2-020) 41013947-41214493 protein_coding
ENST00000509475 (APBB2-004) 40890309-41014385 retained_intron
ENST00000510670 (APBB2-026) 40822030-40857192 protein_coding
ENST00000510925 (APBB2-030) 40816085-40830515 nonsense_mediated_decay
ENST00000511120 (APBB2-022) 40893363-40935440 retained_intron
ENST00000511572 (APBB2-017) 41065605-41214569 processed_transcript
ENST00000512510 (APBB2-029) 40821983-40890425 protein_coding
ENST00000513140 (APBB2-001) 40814607-41214458 protein_coding
ENST00000513493 (APBB2-023) 40825887-40893272 protein_coding
ENST00000513516 (APBB2-027) 40823668-40857177 protein_coding
ENST00000513611 (APBB2-006) 40815313-41014385 protein_coding
ENST00000514094 (APBB2-021) 40826786-40934487 retained_intron
ENST00000514920 (APBB2-028) 40823644-40842516 protein_coding
ENST00000543538 (APBB2-201) 40810028-40857155 protein_coding
ENSG00000199790 (RNU6-836P)
RNA, U6 small nuclear 836, pseudogene 		ENST00000362920 (RNU6-836P-201) 41084607-41084713 snRNA
ENSG00000201736 (RNA5SP160)
RNA, 5S ribosomal pseudogene 160 		ENST00000364866 (RNA5SP160-201) 40990154-40990273 rRNA
ENSG00000207195 (Y_RNA)
Y RNA 		ENST00000384466 (Y_RNA.1-702) 40826655-40826765 misc_RNA
CIL_00038S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029207-ENSMUSG00000029223 CGP 10090 5:66298861-66687231
GeneTranscriptPositionBiotype
ENSMUSG00000029223 (Uchl1)
ubiquitin carboxy-terminal hydrolase L1 		ENSMUST00000031131 (Uchl1-001) 66676098-66687231 protein_coding
ENSMUST00000176015 (Uchl1-002) 66676893-66687229 retained_intron
ENSMUST00000177194 (Uchl1-003) 66676243-66676845 retained_intron
ENSMUSG00000084544 (Gm23183)
predicted gene, 23183 		ENSMUST00000122595 (Gm23183-201) 66325740-66326062 misc_RNA
ENSMUSG00000089962 (Gm16273)
predicted gene 16273 		ENSMUST00000159409 (Gm16273-001) 66356918-66357185 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038S_0001ENSG00000154277ENST00000284440ENST00000381760ENST00000472501ENST00000503431ENST00000504818ENST00000505232ENST00000508768ENST00000512419ENST00000514764ENSG00000163697ENST00000295974ENST00000506352ENST00000508593ENST00000508707ENST00000509446ENST00000509475ENST00000513611ENST00000543538ENSG00000199790ENST00000362920ENSG00000201736ENST00000364866ENSG00000207195ENST00000384466CIL_00038S_0002ENSMUSG00000029223ENSMUST00000031131ENSMUST00000176015ENSMUST00000177194ENSMUSG00000084544ENSMUST00000122595ENSMUSG00000089962ENSMUST00000159409
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154277 ENST00000284440 1.240±0.00 N/A 1.422±0.00 139.140±0.00 8.522±5.79 N/A 0.116±0.00 N/A 0.735±0.57 N/A N/A 9.719±8.97 4.221±0.00 6.497±0.00
ENST00000381760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.109±0.00
ENST00000472501 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.792±0.00 N/A N/A N/A N/A
ENST00000503431 6.903±0.00 3.345±0.00 0.461±0.00 226.074±177.75 53.510±0.00 14.916±11.79 1.926±0.00 55.728±0.00 N/A 3.017±0.00 1.716±0.00 4.259±4.44 3.231±1.57 10.469±4.42
ENST00000504818 N/A N/A N/A N/A N/A 1.160±0.00 N/A N/A 0.927±0.00 N/A N/A N/A N/A N/A
ENST00000505232 N/A N/A N/A N/A N/A 7.328±0.00 N/A N/A N/A N/A N/A 9.912±0.00 N/A N/A
ENST00000508768 N/A N/A 0.483±0.00 N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A
ENST00000510566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512419 1.145±0.00 1.101±0.00 N/A N/A N/A N/A N/A N/A N/A 1.153±0.00 0.664±0.00 6.063±5.81 1.549±0.21 3.752±0.00
ENST00000512788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514764 2.239±0.00 1.370±0.00 N/A 195.254±0.00 29.482±0.00 16.367±0.00 3.954±0.00 27.006±0.00 0.191±0.00 4.525±0.00 1.633±0.99 23.767±8.81 5.362±2.32 8.386±0.00
ENST00000514924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163697 ENST00000295974 1.824±0.00 0.733±0.00 2.094±0.00 2.886±0.31 2.884±1.85 2.567±0.88 0.714±0.02 2.885±0.00 2.584±0.00 3.165±0.00 0.463±0.00 3.223±2.83 0.964±0.44 4.272±0.00
ENST00000502682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506352 N/A N/A 4.813±0.00 N/A 1.668±0.00 N/A 0.782±0.00 N/A N/A 2.594±0.00 0.872±0.00 N/A N/A N/A
ENST00000506999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508593 N/A N/A N/A 3.941±0.00 2.552±0.00 3.308±0.00 1.439±0.24 2.108±0.00 6.198±0.00 4.141±0.00 N/A 3.444±2.79 2.366±0.44 N/A
ENST00000508676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508707 N/A N/A 17.401±0.00 N/A N/A N/A 8.356±0.00 N/A 17.863±0.00 N/A 4.205±0.00 N/A N/A N/A
ENST00000509446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.325±0.00 N/A N/A N/A
ENST00000509475 N/A N/A N/A 6.538±0.00 N/A N/A N/A 3.852±0.00 N/A N/A N/A N/A N/A N/A
ENST00000510670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513611 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.182±0.00 1.114±0.13 N/A 2.714±1.15 2.115±0.00
ENST00000514094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543538 N/A N/A N/A N/A N/A N/A N/A 1.705±0.00 0.721±0.00 N/A N/A N/A N/A N/A
ENSG00000199790 ENST00000362920 N/A N/A N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201736 ENST00000364866 N/A N/A N/A N/A 0.541±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207195 ENST00000384466 N/A 1.226±0.00 N/A 0.425±0.00 0.623±0.00 1.325±0.00 0.538±0.00 N/A N/A N/A N/A 1.700±0.00 N/A 0.367±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029223 ENSMUST00000031131 3.570±0.82 49.621±20.93 178.322±41.54 303.441±67.87 1.467±0.55 16.086±3.11 3.497±1.24 5.780±1.35 0.979±0.22 2.153±0.68 2.095±0.88 55.690±32.60 2.433±1.27 20.368±7.99
ENSMUST00000176015 1.818±0.73 8.793±0.43 112.535±38.13 207.039±54.64 1.428±0.58 8.322±2.67 3.271±0.56 2.654±1.41 0.709±0.70 2.395±0.54 1.155±0.60 44.776±18.27 2.378±1.70 14.871±6.11
ENSMUST00000177194 N/A N/A N/A N/A 0.869±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.588±0.00
ENSMUSG00000084544 ENSMUST00000122595 0.709±0.45 0.619±0.28 0.485±0.05 0.788±0.65 0.478±0.00 0.574±0.18 0.801±0.08 0.499±0.55 0.129±0.06 0.711±0.65 N/A 1.023±0.56 0.590±0.26 0.549±0.37
ENSMUSG00000089962 ENSMUST00000159409 N/A N/A 0.466±0.00 0.092±0.01 N/A N/A 0.402±0.00 N/A N/A 0.617±0.00 N/A N/A 0.280±0.22 N/A

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