C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 55b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159745 Tmem55b-005 ENSMUSG00000035953 10090 - 14:50927217-50930851 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungOvaryPlacentaENSMUST00000159745
Transcript ID Brain Breast Heart Liver Lung Ovary Placenta
ENSMUST00000159745 5.915±3.48 4.723±0.00 1.621±0.33 3.315±0.00 5.720±0.00 3.686±0.06 1.509±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z3 CIL_0004Z3_0003 CGP 14:50906478-50927139
CIL_0001O8 CIL_0001O8_0002 CGP 14:50924968-50930856
CIL_0001O9 CIL_0001O9_0002 CGP 14:50926070-50965237

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250489 TMEM55B-001 protein_coding Homo_sapiens 0 712
ENST00000398020 TMEM55B-003 protein_coding Homo_sapiens 0 712
ENST00000554028 TMEM55B-005 protein_coding Homo_sapiens 0 231
ENST00000556093 TMEM55B-004 protein_coding Homo_sapiens 0 265
ENST00000557041 TMEM55B-002 retained_intron Homo_sapiens 0 728

Loading