C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159928 Atxn2-013 ENSMUSG00000042605 10090 + 5:121805579-121814734 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377617 ATXN2-001 protein_coding Homo_sapiens 0 577
ENST00000389153 ATXN2-002 protein_coding Homo_sapiens 0 577
ENST00000389154 ATXN2-004 protein_coding Homo_sapiens 0 1077
ENST00000468920 ATXN2-015 retained_intron Homo_sapiens 0 475
ENST00000475132 ATXN2-013 protein_coding Homo_sapiens 6e-23 111
ENST00000482777 ATXN2-006 retained_intron Homo_sapiens 0 492
ENST00000483311 ATXN2-005 nonsense_mediated_decay Homo_sapiens 0 577
ENST00000484991 ATXN2-014 retained_intron Homo_sapiens 0 508
ENST00000535949 ATXN2-016 protein_coding Homo_sapiens 0 475
ENST00000542287 ATXN2-011 protein_coding Homo_sapiens 0 579
ENST00000550104 ATXN2-201 protein_coding Homo_sapiens 0 577
ENST00000550844 ATXN2-012 protein_coding Homo_sapiens 0 577
ENST00000550889 ATXN2-023 retained_intron Homo_sapiens 0 237
ENST00000551551 ATXN2-024 retained_intron Homo_sapiens 0 285
ENST00000551755 ATXN2-021 nonsense_mediated_decay Homo_sapiens 4e-20 102
ENST00000608853 ATXN2-025 protein_coding Homo_sapiens 0 577
ENST00000616825 ATXN2-202 protein_coding Homo_sapiens 0 508

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