C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XXII, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160513 Col22a1-004 ENSMUSG00000079022 10090 - 15:71868881-71897616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyOvaryPlacentaTestisENSMUST00000160513
Transcript ID Breast Colon Kidney Ovary Placenta Testis
ENSMUST00000160513 0.134±0.00 0.275±0.01 0.052±0.00 0.646±0.00 0.330±0.16 48.097±29.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PS CIL_0004PS_0002 CGP 15:71445678-72034227
CIL_0004PZ CIL_0004PZ_0002 CGP 15:71795795-72546279

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303045 COL22A1-001 protein_coding Homo_sapiens 0 270
ENST00000341807 COL22A1-003 processed_transcript Homo_sapiens 0 636
ENST00000435777 COL22A1-201 protein_coding Homo_sapiens 0 636

Loading