C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XXII, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341807 COL22A1-003 ENSG00000169436 9606 - 8:138588235-138722193 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000341807
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000341807 0.006±0.00 0.055±0.00 0.149±0.00 0.045±0.00 0.014±0.00 0.017±0.00 0.016±0.00 0.059±0.00 0.092±0.00 0.148±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PS CIL_0004PS_0001 CGP 8:138130023-138914006
CIL_0004PZ CIL_0004PZ_0001 CGP 8:138588235-139703056

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159993 Col22a1-001 protein_coding Mus_musculus 0 2612
ENSMUST00000160513 Col22a1-004 protein_coding Mus_musculus 0 636
ENSMUST00000162081 Col22a1-002 processed_transcript Mus_musculus 0 213

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