C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169436-ENSG00000169427 CGP 9606 8:138588235-139703056
GeneTranscriptPositionBiotype
ENSG00000169427 (KCNK9)
potassium channel, subfamily K, member 9 		ENST00000303015 (KCNK9-201) 139612561-139702998 protein_coding
ENST00000519923 (KCNK9-005) 139612326-139616047 processed_transcript
ENST00000520439 (KCNK9-002) 139618006-139703056 protein_coding
ENST00000522317 (KCNK9-001) 139600838-139703041 nonsense_mediated_decay
ENST00000523477 (KCNK9-003) 139600839-139617005 processed_transcript
ENST00000523653 (KCNK9-004) 139601078-139602064 processed_transcript
ENSG00000169436 (COL22A1)
collagen, type XXII, alpha 1 		ENST00000303045 (COL22A1-001) 138588235-138913993 protein_coding
ENST00000341807 (COL22A1-003) 138588235-138722193 processed_transcript
ENST00000435777 (COL22A1-201) 138588897-138883211 protein_coding
ENST00000484387 (COL22A1-002) 138878133-138914006 processed_transcript
ENST00000487854 (COL22A1-004) 138607938-138620620 processed_transcript
ENST00000517515 (COL22A1-006) 138825719-138828105 processed_transcript
ENST00000522546 (COL22A1-007) 138777907-138779562 protein_coding
ENSG00000253783 (CTD-2534J5.1)
 ENST00000517640 (CTD-2534J5.1-001) 139114193-139127953 lincRNA
ENSG00000254258 (RP11-398H6.1)
 ENST00000522373 (RP11-398H6.1-001) 139460062-139463016 lincRNA
CIL_0004PZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079022-ENSMUSG00000036760 CGP 10090 15:71795795-72546279
GeneTranscriptPositionBiotype
ENSMUSG00000036760 (Kcnk9)
potassium channel, subfamily K, member 9 		ENSMUST00000044624 (Kcnk9-201) 72512119-72546279 protein_coding
ENSMUSG00000079022 (Col22a1)
collagen, type XXII, alpha 1 		ENSMUST00000159410 (Col22a1-003) 71922900-71954399 protein_coding
ENSMUST00000159993 (Col22a1-001) 71795795-72034227 protein_coding
ENSMUST00000160513 (Col22a1-004) 71868881-71897616 protein_coding
ENSMUST00000162081 (Col22a1-002) 71904728-71954374 processed_transcript
ENSMUSG00000095129 (Gm23217)
predicted gene, 23217 		ENSMUST00000178482 (Gm23217-201) 72255350-72255456 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PZ_0001ENSG00000169427ENST00000303015ENST00000519923ENST00000520439ENST00000522317ENST00000523477ENST00000523653ENSG00000169436ENST00000303045ENST00000341807ENST00000435777ENST00000484387ENST00000487854ENST00000517515ENST00000522546ENSG00000253783ENST00000517640ENSG00000254258ENST00000522373CIL_0004PZ_0002ENSMUSG00000036760ENSMUST00000044624ENSMUSG00000079022ENSMUST00000159410ENSMUST00000159993ENSMUST00000160513ENSMUST00000162081ENSMUSG00000095129ENSMUST00000178482
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PZ_0001ENSG00000169427ENST00000303015ENST00000520439ENST00000522317ENST00000523477ENST00000523653ENSG00000169436ENST00000303045ENST00000341807ENST00000435777ENST00000484387ENST00000517515ENST00000522546ENSG00000253783ENST00000517640ENSG00000254258ENST00000522373CIL_0004PZ_0002ENSMUSG00000036760ENSMUST00000044624ENSMUSG00000079022ENSMUST00000159410ENSMUST00000159993ENSMUST00000160513ENSMUST00000162081ENSMUSG00000095129ENSMUST00000178482
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169427 ENST00000303015 N/A N/A N/A N/A N/A 0.156±0.00 N/A N/A N/A N/A 0.159±0.00 0.032±0.00 0.052±0.00 0.199±0.03
ENST00000519923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520439 0.080±0.00 N/A N/A 1.334±0.23 N/A 0.591±0.00 N/A N/A N/A N/A N/A N/A N/A 0.119±0.00
ENST00000522317 N/A 0.008±0.00 N/A 1.403±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523477 0.007±0.00 N/A N/A 0.378±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A
ENST00000523653 N/A 0.028±0.00 N/A N/A N/A N/A N/A 0.225±0.00 N/A N/A N/A 0.080±0.00 N/A 0.425±0.00
ENSG00000169436 ENST00000303045 N/A N/A 0.019±0.00 0.014±0.00 N/A 0.038±0.00 N/A 0.053±0.00 0.063±0.00 N/A N/A 0.148±0.09 0.017±0.00 N/A
ENST00000341807 N/A N/A 0.006±0.00 0.055±0.00 0.149±0.00 0.045±0.00 0.014±0.00 0.017±0.00 0.016±0.00 N/A N/A 0.059±0.00 0.092±0.00 0.148±0.00
ENST00000435777 N/A 0.028±0.00 N/A N/A 0.019±0.00 N/A 0.030±0.01 N/A N/A 0.090±0.00 N/A N/A N/A 0.387±0.12
ENST00000484387 N/A 0.111±0.00 N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.01 N/A
ENST00000487854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517515 N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000522546 N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A 0.197±0.00 N/A N/A
ENSG00000253783 ENST00000517640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00
ENSG00000254258 ENST00000522373 0.097±0.00 1.291±0.00 0.107±0.00 0.548±0.51 0.506±0.46 0.535±0.15 0.168±0.04 0.663±0.03 0.205±0.06 0.237±0.00 0.111±0.00 0.355±0.17 0.314±0.21 0.942±0.58
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036760 ENSMUST00000044624 N/A N/A N/A N/A N/A 0.079±0.03 N/A 0.028±0.00 0.010±0.00 N/A N/A N/A 0.071±0.09 0.023±0.00
ENSMUSG00000079022 ENSMUST00000159410 N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.09 N/A N/A N/A N/A 62.674±50.06
ENSMUST00000159993 0.125±0.16 0.248±0.07 0.034±0.00 0.548±0.43 0.057±0.03 0.083±0.01 0.054±0.01 0.009±0.00 0.010±0.01 0.045±0.01 2.584±0.75 0.194±0.07 0.088±0.06 N/A
ENSMUST00000160513 N/A N/A N/A N/A 0.134±0.00 0.275±0.01 N/A 0.052±0.00 N/A N/A N/A 0.646±0.00 0.330±0.16 48.097±29.64
ENSMUST00000162081 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.191±0.00 0.070±0.00 N/A
ENSMUSG00000095129 ENSMUST00000178482 N/A N/A 6.072±0.00 2.435±0.00 N/A N/A N/A N/A 5.172±0.00 N/A N/A N/A N/A N/A

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