C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147724-ENSG00000169436 CGP 9606 8:138130023-138914006
GeneTranscriptPositionBiotype
ENSG00000169436 (COL22A1)
collagen, type XXII, alpha 1 		ENST00000303045 (COL22A1-001) 138588235-138913993 protein_coding
ENST00000341807 (COL22A1-003) 138588235-138722193 processed_transcript
ENST00000435777 (COL22A1-201) 138588897-138883211 protein_coding
ENST00000484387 (COL22A1-002) 138878133-138914006 processed_transcript
ENST00000487854 (COL22A1-004) 138607938-138620620 processed_transcript
ENST00000517515 (COL22A1-006) 138825719-138828105 processed_transcript
ENST00000522546 (COL22A1-007) 138777907-138779562 protein_coding
CIL_0004PS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036800-ENSMUSG00000079022 CGP 10090 15:71445678-72034227
GeneTranscriptPositionBiotype
ENSMUSG00000036800 (Fam135b)
family with sequence similarity 135, member B 		ENSMUST00000022953 (Fam135b-201) 71445678-71727838 protein_coding
ENSMUSG00000079022 (Col22a1)
collagen, type XXII, alpha 1 		ENSMUST00000159410 (Col22a1-003) 71922900-71954399 protein_coding
ENSMUST00000159993 (Col22a1-001) 71795795-72034227 protein_coding
ENSMUST00000160513 (Col22a1-004) 71868881-71897616 protein_coding
ENSMUST00000162081 (Col22a1-002) 71904728-71954374 processed_transcript
ENSMUSG00000088895 (Gm22519)
predicted gene, 22519 		ENSMUST00000158270 (Gm22519-201) 71794188-71794365 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PS_0001ENSG00000169436ENST00000303045ENST00000341807ENST00000435777ENST00000484387ENST00000487854ENST00000517515ENST00000522546CIL_0004PS_0002ENSMUSG00000036800ENSMUST00000022953ENSMUSG00000079022ENSMUST00000159410ENSMUST00000159993ENSMUST00000160513ENSMUST00000162081ENSMUSG00000088895ENSMUST00000158270
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PS_0001ENSG00000169436ENST00000303045ENST00000341807ENST00000435777ENST00000484387ENST00000517515ENST00000522546CIL_0004PS_0002ENSMUSG00000036800ENSMUST00000022953ENSMUSG00000079022ENSMUST00000159410ENSMUST00000159993ENSMUST00000160513ENSMUST00000162081ENSMUSG00000088895ENSMUST00000158270
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169436 ENST00000303045 N/A N/A 0.019±0.00 0.014±0.00 N/A 0.038±0.00 N/A 0.053±0.00 0.063±0.00 N/A N/A 0.148±0.09 0.017±0.00 N/A
ENST00000341807 N/A N/A 0.006±0.00 0.055±0.00 0.149±0.00 0.045±0.00 0.014±0.00 0.017±0.00 0.016±0.00 N/A N/A 0.059±0.00 0.092±0.00 0.148±0.00
ENST00000435777 N/A 0.028±0.00 N/A N/A 0.019±0.00 N/A 0.030±0.01 N/A N/A 0.090±0.00 N/A N/A N/A 0.387±0.12
ENST00000484387 N/A 0.111±0.00 N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.01 N/A
ENST00000487854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517515 N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000522546 N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A 0.197±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036800 ENSMUST00000022953 0.019±0.01 0.017±0.00 N/A 0.236±0.00 0.017±0.01 0.016±0.00 0.006±0.00 0.006±0.00 0.002±0.00 0.026±0.02 N/A 0.014±0.01 0.095±0.07 5.739±1.10
ENSMUSG00000079022 ENSMUST00000159410 N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.09 N/A N/A N/A N/A 62.674±50.06
ENSMUST00000159993 0.125±0.16 0.248±0.07 0.034±0.00 0.548±0.43 0.057±0.03 0.083±0.01 0.054±0.01 0.009±0.00 0.010±0.01 0.045±0.01 2.584±0.75 0.194±0.07 0.088±0.06 N/A
ENSMUST00000160513 N/A N/A N/A N/A 0.134±0.00 0.275±0.01 N/A 0.052±0.00 N/A N/A N/A 0.646±0.00 0.330±0.16 48.097±29.64
ENSMUST00000162081 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.191±0.00 0.070±0.00 N/A
ENSMUSG00000088895 ENSMUST00000158270 N/A N/A 0.394±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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