C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: host cell factor C2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160681 Hcfc2-002 ENSMUSG00000020246 10090 + 10:82728349-82741395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000160681
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000160681 2.174±0.04 2.026±0.00 2.293±0.76 4.067±1.58 2.482±0.01 1.759±0.50 1.078±0.19 1.710±1.01 1.218±0.51 2.581±0.52 2.597±1.39 1.506±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S8 CIL_0002S8_0002 CGP 10:82650433-82742428
CIL_0002SA CIL_0002SA_0002 CGP 10:82696160-82764144

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229330 HCFC2-001 protein_coding Homo_sapiens 0 1114
ENST00000544223 HCFC2-002 nonsense_mediated_decay Homo_sapiens 0 1074
ENST00000550335 HCFC2-005 processed_transcript Homo_sapiens 0 804
ENST00000552343 HCFC2-006 retained_intron Homo_sapiens 0 917

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