C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002S8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120820-ENSG00000111727 CGP 9606 12:103988984-104106524
GeneTranscriptPositionBiotype
ENSG00000111727 (HCFC2)
host cell factor C2 		ENST00000229330 (HCFC2-001) 104064457-104106524 protein_coding
ENST00000544223 (HCFC2-002) 104064542-104103466 nonsense_mediated_decay
ENST00000547194 (HCFC2-003) 104080433-104082756 retained_intron
ENST00000550335 (HCFC2-005) 104090923-104103301 processed_transcript
ENST00000550444 (HCFC2-004) 104064814-104079473 protein_coding
ENST00000552343 (HCFC2-006) 104098124-104103407 retained_intron
ENSG00000120820 (GLT8D2)
glycosyltransferase 8 domain containing 2 		ENST00000360814 (GLT8D2-002) 103988984-104050137 protein_coding
ENST00000546436 (GLT8D2-003) 103988989-104029776 protein_coding
ENST00000546851 (GLT8D2-004) 103999418-104050137 protein_coding
ENST00000547583 (GLT8D2-005) 104012599-104050136 protein_coding
ENST00000548660 (GLT8D2-001) 103989280-104064183 protein_coding
ENST00000550816 (GLT8D2-006) 103999359-104050021 retained_intron
ENST00000552572 (GLT8D2-007) 103993864-103996846 retained_intron
ENSG00000216285 (RP11-490H24.5)
 ENST00000547454 (RP11-490H24.5-001) 104030779-104031543 processed_pseudogene
CIL_0002S8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020251-ENSMUSG00000020246 CGP 10090 10:82650433-82742428
GeneTranscriptPositionBiotype
ENSMUSG00000020246 (Hcfc2)
host cell factor C2 		ENSMUST00000020478 (Hcfc2-001) 82699007-82742428 protein_coding
ENSMUST00000160681 (Hcfc2-002) 82728349-82741395 protein_coding
ENSMUST00000160845 (Hcfc2-003) 82696160-82709057 processed_transcript
ENSMUST00000162422 (Hcfc2-004) 82699211-82712230 nonsense_mediated_decay
ENSMUSG00000020251 (Glt8d2)
glycosyltransferase 8 domain containing 2 		ENSMUST00000020485 (Glt8d2-001) 82650433-82690650 protein_coding
ENSMUST00000065815 (Glt8d2-003) 82652543-82690617 protein_coding
ENSMUST00000125505 (Glt8d2-004) 82654772-82690617 nonsense_mediated_decay
ENSMUST00000128142 (Glt8d2-007) 82651308-82653199 retained_intron
ENSMUST00000140071 (Glt8d2-002) 82669279-82690629 retained_intron
ENSMUST00000150269 (Glt8d2-006) 82651561-82652980 protein_coding
ENSMUST00000155529 (Glt8d2-005) 82664637-82670468 protein_coding
ENSMUSG00000034674 (Tdg)
thymine DNA glycosylase 		ENSMUST00000092266 (Tdg-001) 82629828-82650324 protein_coding
ENSMUST00000125970 (Tdg-007) 82644438-82647601 retained_intron
ENSMUST00000133227 (Tdg-003) 82629876-82641322 processed_transcript
ENSMUST00000135652 (Tdg-006) 82644024-82644661 retained_intron
ENSMUST00000142658 (Tdg-008) 82646905-82648236 retained_intron
ENSMUST00000145370 (Tdg-004) 82630667-82644289 protein_coding
ENSMUST00000148790 (Tdg-005) 82641162-82644305 retained_intron
ENSMUST00000151390 (Tdg-002) 82629859-82650799 protein_coding
ENSMUST00000176195 (Tdg-010) 82641440-82648879 nonsense_mediated_decay
ENSMUST00000176326 (Tdg-009) 82644478-82649102 protein_coding
ENSMUST00000177353 (Tdg-011) 82641441-82648686 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S8_0001ENSG00000111727ENST00000229330ENST00000544223ENST00000547194ENST00000550335ENST00000550444ENST00000552343ENSG00000120820ENST00000360814ENST00000546436ENST00000546851ENST00000547583ENST00000548660ENST00000550816ENST00000552572ENSG00000216285ENST00000547454CIL_0002S8_0002ENSMUSG00000020246ENSMUST00000020478ENSMUST00000160681ENSMUST00000160845ENSMUST00000162422ENSMUSG00000020251ENSMUST00000020485ENSMUST00000065815ENSMUST00000125505ENSMUST00000128142ENSMUST00000140071ENSMUST00000150269ENSMUST00000155529ENSMUSG00000034674ENSMUST00000092266ENSMUST00000125970ENSMUST00000133227ENSMUST00000135652ENSMUST00000142658ENSMUST00000145370ENSMUST00000148790ENSMUST00000151390ENSMUST00000176195ENSMUST00000176326ENSMUST00000177353
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S8_0001ENSG00000111727ENST00000229330ENST00000544223ENST00000550444ENSG00000120820ENST00000360814ENST00000546436ENST00000546851ENST00000548660ENST00000550816ENSG00000216285ENST00000547454CIL_0002S8_0002ENSMUSG00000020246ENSMUST00000020478ENSMUST00000160681ENSMUST00000160845ENSMUSG00000020251ENSMUST00000020485ENSMUST00000065815ENSMUST00000155529ENSMUSG00000034674ENSMUST00000092266ENSMUST00000133227ENSMUST00000142658ENSMUST00000151390ENSMUST00000176195ENSMUST00000176326
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111727 ENST00000229330 1.814±0.00 0.490±0.00 1.070±0.00 1.969±0.89 2.014±1.09 2.348±0.09 1.026±0.22 2.114±0.23 1.971±1.75 2.110±1.41 1.717±0.94 1.394±0.62 0.906±0.14 3.405±0.30
ENST00000544223 1.345±0.00 N/A 1.666±0.00 1.794±0.00 1.799±0.23 1.735±0.25 1.262±0.00 1.553±0.00 2.189±1.40 1.776±0.65 1.574±0.00 1.247±0.00 0.623±0.13 15.693±3.08
ENST00000547194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.368±0.00
ENST00000552343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120820 ENST00000360814 1.038±0.00 1.873±0.00 0.130±0.00 0.175±0.02 3.094±0.20 5.553±0.00 1.371±1.25 0.810±0.00 1.342±0.94 3.794±2.49 0.787±0.00 7.438±5.50 4.108±1.67 3.975±2.88
ENST00000546436 N/A N/A 0.069±0.00 N/A N/A 1.275±0.00 0.437±0.00 N/A N/A N/A N/A 7.729±0.00 N/A N/A
ENST00000546851 N/A N/A N/A N/A N/A N/A 0.529±0.00 N/A N/A N/A 0.914±0.00 N/A N/A N/A
ENST00000547583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548660 0.295±0.00 0.874±0.00 N/A N/A 1.044±0.00 1.853±0.00 0.868±0.00 0.529±0.00 N/A N/A 0.299±0.08 0.719±0.00 0.735±0.00 1.884±0.36
ENST00000550816 N/A N/A N/A N/A N/A N/A 1.075±0.00 N/A 3.339±0.00 N/A N/A 4.291±1.53 3.442±0.00 3.335±0.00
ENST00000552572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000216285 ENST00000547454 N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020246 ENSMUST00000020478 2.526±0.14 2.313±1.14 4.083±1.06 7.768±0.50 4.011±0.70 1.231±0.15 2.570±0.94 1.778±0.60 1.846±1.00 1.640±0.63 2.206±0.64 2.741±1.22 5.255±0.62 11.151±4.53
ENSMUST00000160681 2.174±0.04 2.026±0.00 2.293±0.76 4.067±1.58 2.482±0.01 N/A 1.759±0.50 1.078±0.19 1.710±1.01 N/A 1.218±0.51 2.581±0.52 2.597±1.39 1.506±0.00
ENSMUST00000160845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.151±0.00 N/A 129.088±0.00
ENSMUST00000162422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020251 ENSMUST00000020485 2.069±0.19 N/A 10.408±0.18 2.798±0.00 2.905±0.49 N/A 0.907±0.12 N/A N/A 2.616±0.37 0.833±0.00 N/A N/A 2.365±0.00
ENSMUST00000065815 N/A N/A N/A 12.906±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.385±0.00
ENSMUST00000125505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.836±0.00
ENSMUSG00000034674 ENSMUST00000092266 2.558±0.65 N/A 9.268±0.80 20.136±12.05 4.022±1.06 2.876±1.18 2.399±0.42 2.849±0.79 6.097±5.12 3.112±0.66 4.267±0.96 4.742±2.45 11.327±3.76 1.404±0.55
ENSMUST00000125970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.814±0.82 N/A N/A
ENSMUST00000135652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.288±0.00 N/A N/A
ENSMUST00000145370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151390 4.826±1.68 9.389±3.44 2.939±0.41 12.098±1.75 3.834±1.47 5.964±2.65 0.733±0.17 2.189±0.62 3.316±0.58 4.881±0.95 0.721±0.20 7.972±1.94 4.161±1.53 0.980±0.08
ENSMUST00000176195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.227±0.00 N/A
ENSMUST00000176326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.628±0.47 10.839±1.41 21.694±8.80 N/A
ENSMUST00000177353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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