C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: matrin 3, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160839 Matr3-ps2-001 ENSMUSG00000089748 10090 - 8:104845349-104846373 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverPlacentaENSMUST00000160839
Transcript ID Bladder Breast Colon Liver Placenta
ENSMUST00000160839 0.008±0.00 0.041±0.00 0.095±0.00 0.024±0.00 0.017±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361059 MATR3-201 protein_coding Homo_sapiens 0 691
ENST00000394800 MATR3-001 protein_coding Homo_sapiens 0 691
ENST00000394805 MATR3-002 protein_coding Homo_sapiens 0 691
ENST00000415279 RP11-90H3.1-001 processed_pseudogene Homo_sapiens 0 619
ENST00000502394 MATR3-026 protein_coding Homo_sapiens 0 272
ENST00000502422 MATR3-004 retained_intron Homo_sapiens 0 390
ENST00000502499 MATR3-010 protein_coding Homo_sapiens 0 457
ENST00000502929 MATR3-003 protein_coding Homo_sapiens 0 691
ENST00000503340 MATR3-044 protein_coding Homo_sapiens 0 272
ENST00000503811 MATR3-008 protein_coding Homo_sapiens 0 553
ENST00000504023 MATR3-045 protein_coding Homo_sapiens 0 272
ENST00000504045 MATR3-011 protein_coding Homo_sapiens 0 627
ENST00000504203 MATR3-012 protein_coding Homo_sapiens 0 551
ENST00000504311 MATR3-029 protein_coding Homo_sapiens 0 455
ENST00000504643 MATR3-007 retained_intron Homo_sapiens 0 390
ENST00000505625 MATR3-005 retained_intron Homo_sapiens 0 553
ENST00000506147 MATR3-018 protein_coding Homo_sapiens 0 243
ENST00000508689 MATR3-032 protein_coding Homo_sapiens 0 272
ENST00000509644 MATR3-025 protein_coding Homo_sapiens 0 412
ENST00000509918 MATR3-039 processed_transcript Homo_sapiens 0 300
ENST00000509990 MATR3-013 protein_coding Homo_sapiens 0 691
ENST00000510056 MATR3-009 protein_coding Homo_sapiens 0 691
ENST00000511249 MATR3-034 protein_coding Homo_sapiens 0 204
ENST00000511978 MATR3-037 processed_transcript Homo_sapiens 0 298
ENST00000512876 MATR3-028 protein_coding Homo_sapiens 0 553
ENST00000514402 MATR3-038 retained_intron Homo_sapiens 0 206
ENST00000514488 MATR3-043 protein_coding Homo_sapiens 0 272
ENST00000514528 MATR3-033 protein_coding Homo_sapiens 0 503
ENST00000514694 MATR3-024 protein_coding Homo_sapiens 0 272
ENST00000515833 MATR3-036 protein_coding Homo_sapiens 0 396
ENST00000618441 MATR3-202 protein_coding Homo_sapiens 0 691
ENST00000620916 MATR3-203 protein_coding Homo_sapiens 3e-33 148

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