C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415279 RP11-90H3.1-001 ENSG00000232952 9606 + 1:105891739-105893517 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleTestisENST00000415279
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Testis
ENST00000415279 0.006±0.00 0.007±0.00 0.083±0.04 0.026±0.00 0.018±0.00 0.012±0.00 0.032±0.00 0.012±0.00 0.006±0.00 0.073±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190029 Matr3-007 protein_coding Mus_musculus 0 2521
ENSMUST00000187389 Matr3-008 protein_coding Mus_musculus 0 2521
ENSMUST00000166793 Matr3-001 protein_coding Mus_musculus 0 2521
ENSMUST00000186614 Matr3-010 protein_coding Mus_musculus 0 1690
ENSMUST00000187980 Matr3-016 retained_intron Mus_musculus 0 1349
ENSMUST00000188275 Matr3-006 protein_coding Mus_musculus 0 1181
ENSMUST00000190653 Matr3-003 protein_coding Mus_musculus 0 1181
ENSMUST00000186796 Matr3-005 protein_coding Mus_musculus 0 1179
ENSMUST00000188767 Matr3-004 nonsense_mediated_decay Mus_musculus 0 1133
ENSMUST00000190121 Matr3-002 protein_coding Mus_musculus 0 1077
ENSMUST00000188359 Matr3-015 protein_coding Mus_musculus 0 706
ENSMUST00000160839 Matr3-ps2-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000187793 RP23-461O23.5-004 protein_coding Mus_musculus 0 588
ENSMUST00000189039 Matr3-013 protein_coding Mus_musculus 0 534
ENSMUST00000187513 RP23-461O23.5-001 protein_coding Mus_musculus 0 388
ENSMUST00000190458 RP23-461O23.5-005 protein_coding Mus_musculus 0 268
ENSMUST00000186292 Matr3-011 protein_coding Mus_musculus 0 267
ENSMUST00000186158 Matr3-012 retained_intron Mus_musculus 0 233
ENSMUST00000189163 RP23-461O23.5-003 protein_coding Mus_musculus 0 207

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