C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | matrin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000394800  |
MATR3-001 |
ENSG00000015479 |
9606 | + |
5:139274104-139331671  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005D1 | CIL_0005D1_0001 | CGP | 5:138868923-139293557 |
| CIL_0005D0 | CIL_0005D0_0001 | CGP | 5:139273752-139369720 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0005634 | IDA:IEA | nucleus |
| GO:0008270 | IEA | zinc ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000166793
|
Matr3-001 | protein_coding | Mus_musculus | 0 | 3633 |
|
ENSMUST00000190029
|
Matr3-007 | protein_coding | Mus_musculus | 0 | 3631 |
|
ENSMUST00000187389
|
Matr3-008 | protein_coding | Mus_musculus | 0 | 3631 |
|
ENSMUST00000186614
|
Matr3-010 | protein_coding | Mus_musculus | 0 | 2285 |
|
ENSMUST00000190121
|
Matr3-002 | protein_coding | Mus_musculus | 0 | 1775 |
|
ENSMUST00000188275
|
Matr3-006 | protein_coding | Mus_musculus | 0 | 1744 |
|
ENSMUST00000186796
|
Matr3-005 | protein_coding | Mus_musculus | 0 | 1744 |
|
ENSMUST00000190653
|
Matr3-003 | protein_coding | Mus_musculus | 0 | 1744 |
|
ENSMUST00000187980
|
Matr3-016 | retained_intron | Mus_musculus | 0 | 1740 |
|
ENSMUST00000188767
|
Matr3-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1698 |
|
ENSMUST00000188359
|
Matr3-015 | protein_coding | Mus_musculus | 0 | 1075 |
|
ENSMUST00000187513
|
RP23-461O23.5-001 | protein_coding | Mus_musculus | 0 | 737 |
|
ENSMUST00000160839
|
Matr3-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 691 |
|
ENSMUST00000189039
|
Matr3-013 | protein_coding | Mus_musculus | 0 | 651 |
|
ENSMUST00000187793
|
RP23-461O23.5-004 | protein_coding | Mus_musculus | 0 | 649 |
|
ENSMUST00000190458
|
RP23-461O23.5-005 | protein_coding | Mus_musculus | 0 | 590 |
|
ENSMUST00000186292
|
Matr3-011 | protein_coding | Mus_musculus | 0 | 582 |
|
ENSMUST00000187543
|
Matr3-009 | protein_coding | Mus_musculus | 0 | 435 |
|
ENSMUST00000186158
|
Matr3-012 | retained_intron | Mus_musculus | 0 | 261 |
|
ENSMUST00000189163
|
RP23-461O23.5-003 | protein_coding | Mus_musculus | 0 | 243 |
|
ENSMUST00000190570
|
RP23-461O23.5-002 | processed_transcript | Mus_musculus | 0 | 224 |
|
ENSMUST00000186295
|
RP23-461O23.5-006 | processed_transcript | Mus_musculus | 0 | 191 |
