C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161070 Cntn6-003 ENSMUSG00000030092 10090 + 6:104492811-104863248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000161070
Transcript ID Brain Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000161070 0.337±0.08 0.011±0.00 0.014±0.00 0.008±0.00 0.002±0.00 0.049±0.02 0.013±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050I CIL_00050I_0002 CGP 6:103510876-104863406
CIL_00050H CIL_00050H_0002 CGP 6:104492790-106699310

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350110 CNTN6-004 protein_coding Homo_sapiens 0 3356
ENST00000394261 CNTN6-003 nonsense_mediated_decay Homo_sapiens 0 808
ENST00000397479 CNTN6-002 nonsense_mediated_decay Homo_sapiens 0 3999
ENST00000413210 CNTN6-005 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000446702 CNTN6-001 protein_coding Homo_sapiens 0 3356
ENST00000485257 CNTN6-006 retained_intron Homo_sapiens 0 414

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