C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161169 Slc30a9-003 ENSMUSG00000029221 10090 + 5:67332118-67353355 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverPlacentaENSMUST00000161169
Transcript ID Bladder Brain Breast Liver Placenta
ENSMUST00000161169 1.311±0.00 2.645±0.68 3.499±0.00 2.062±0.19 1.562±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OI CIL_0007OI_0002 UCNEbase 5:67098377-67633824
CIL_0007YP CIL_0007YP_0002 VISTA 5:67123705-67724669
CIL_0002Z2 CIL_0002Z2_0002 CGP 5:67306955-67427799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264451 SLC30A9-001 protein_coding Homo_sapiens 0 767
ENST00000505523 SLC30A9-006 retained_intron Homo_sapiens 0 544
ENST00000509683 SLC30A9-005 retained_intron Homo_sapiens 0 361
ENST00000513699 SLC30A9-002 nonsense_mediated_decay Homo_sapiens 0 767

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