C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513699 SLC30A9-002 ENSG00000014824 9606 + 4:41990502-42086369 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000513699
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000513699 5.726±0.00 3.990±0.00 15.867±0.00 4.233±1.64 5.186±1.50 9.293±6.58 6.548±5.20 2.300±0.00 3.868±0.96 4.138±0.00 2.895±1.36 2.724±1.01 6.217±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OI CIL_0007OI_0001 UCNEbase 4:41748045-42425642
CIL_0007YP CIL_0007YP_0001 VISTA 4:41848074-42449047
CIL_0002Z2 CIL_0002Z2_0001 CGP 4:41990472-42152878

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113676 Slc30a9-002 protein_coding Mus_musculus 0 1759
ENSMUST00000162372 Slc30a9-001 protein_coding Mus_musculus 0 1757
ENSMUST00000161169 Slc30a9-003 retained_intron Mus_musculus 0 767

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