C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161195 Lrrc9-006 ENSMUSG00000021090 10090 + 12:72442035-72514334 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungOvaryPlacentaENSMUST00000161195
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Ovary Placenta
ENSMUST00000161195 0.172±0.03 0.215±0.09 0.116±0.00 0.160±0.08 0.021±0.00 0.029±0.00 0.109±0.00 0.272±0.11 0.048±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZY CIL_0005ZY_0003 CGP 12:72211752-72514334
CIL_000606 CIL_000606_0003 CGP 12:72441866-72580213

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254271 LRRC9-002 nonsense_mediated_decay Homo_sapiens 0 3735
ENST00000445360 LRRC9-001 protein_coding Homo_sapiens 0 3712
ENST00000568404 LRRC9-003 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000570145 LRRC9-005 protein_coding Homo_sapiens 0 486

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