C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine rich repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254271 LRRC9-002 ENSG00000131951 9606 + 14:59919713-60063559 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000254271
Transcript ID Ovary Testis
ENST00000254271 0.028±0.00 0.334±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZY CIL_0005ZY_0002 CGP 14:59595976-60063559
CIL_000606 CIL_000606_0002 CGP 14:59919713-60169133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161195 Lrrc9-006 processed_transcript Mus_musculus 0 3735
ENSMUST00000162159 Lrrc9-001 protein_coding Mus_musculus 0 3504
ENSMUST00000161284 Lrrc9-002 protein_coding Mus_musculus 0 2867
ENSMUST00000161957 Lrrc9-005 retained_intron Mus_musculus 0 1659
ENSMUST00000162179 Lrrc9-003 retained_intron Mus_musculus 0 1397
ENSMUST00000160394 Lrrc9-004 retained_intron Mus_musculus 0 809

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