C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445360 LRRC9-001 ENSG00000131951 9606 + 14:59919713-60063559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverOvaryTestisENST00000445360
Transcript ID Breast Colon Heart Kidney Liver Ovary Testis
ENST00000445360 0.009±0.00 0.013±0.00 0.012±0.00 0.002±0.00 0.020±0.02 0.014±0.01 1.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZY CIL_0005ZY_0002 CGP 14:59595976-60063559
CIL_000606 CIL_000606_0002 CGP 14:59919713-60169133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161195 Lrrc9-006 processed_transcript Mus_musculus 0 3712
ENSMUST00000162159 Lrrc9-001 protein_coding Mus_musculus 0 3620
ENSMUST00000161284 Lrrc9-002 protein_coding Mus_musculus 0 2935
ENSMUST00000161957 Lrrc9-005 retained_intron Mus_musculus 0 1659
ENSMUST00000162179 Lrrc9-003 retained_intron Mus_musculus 0 1397
ENSMUST00000160394 Lrrc9-004 retained_intron Mus_musculus 0 809

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