C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C7orf55-LUC7L2 readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456182 C7orf55-LUC7L2-003 ENSG00000146963 9606 + 7:139359912-139423151 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000456182
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000456182 15.198±0.00 16.303±0.00 11.519±0.00 8.384±0.00 9.070±0.00 5.691±0.00 5.207±0.00 10.463±0.00 10.064±0.00 26.961±6.66 12.482±8.41 27.923±6.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QB CIL_0002QB_0001 CGP 7:139230356-139346319
CIL_00030D CIL_00030D_0001 CGP 7:139339457-139423457

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161227 Luc7l2-002 protein_coding Mus_musculus 0 2087
ENSMUST00000057692 Luc7l2-001 protein_coding Mus_musculus 0 2085
ENSMUST00000162386 Luc7l2-005 nonsense_mediated_decay Mus_musculus 0 2025
ENSMUST00000160511 Luc7l2-007 nonsense_mediated_decay Mus_musculus 0 1753
ENSMUST00000118402 Gm11889-001 processed_pseudogene Mus_musculus 0 1389
ENSMUST00000160430 Luc7l2-012 protein_coding Mus_musculus 0 1371
ENSMUST00000163047 Luc7l2-004 protein_coding Mus_musculus 0 1184
ENSMUST00000161538 Luc7l2-003 protein_coding Mus_musculus 0 1182
ENSMUST00000159936 Luc7l2-010 nonsense_mediated_decay Mus_musculus 0 564
ENSMUST00000160582 Luc7l2-006 processed_transcript Mus_musculus 0 355

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