C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161284 Lrrc9-002 ENSMUSG00000021090 10090 + 12:72441933-72497239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161284
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161284 0.086±0.00 0.265±0.16 0.009±0.00 0.194±0.00 0.176±0.08 0.042±0.01 0.013±0.00 0.026±0.01 0.091±0.00 0.032±0.00 0.210±0.07 0.072±0.00 20.005±10.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZY CIL_0005ZY_0003 CGP 12:72211752-72514334
CIL_000606 CIL_000606_0003 CGP 12:72441866-72580213

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254271 LRRC9-002 nonsense_mediated_decay Homo_sapiens 0 2867
ENST00000445360 LRRC9-001 protein_coding Homo_sapiens 0 2935
ENST00000570145 LRRC9-005 protein_coding Homo_sapiens 0 488

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