C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161325 Slc24a4-003 ENSMUSG00000041771 10090 + 12:102129391-102266641 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000161325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000161325 0.077±0.00 0.169±0.05 0.005±0.00 0.227±0.00 0.053±0.03 0.035±0.00 0.312±0.15 0.028±0.00 0.054±0.03 0.304±0.00 0.064±0.07 0.124±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002N4 CIL_0002N4_0003 CGP 12:101975974-102267091
CIL_000539 CIL_000539_0002 CGP 12:102128733-102390855

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000157286 si:ch73-335m24.5-201 protein_coding Danio_rerio 3e-35 154
ENSDART00000112438 si:ch73-335m24.5-001 protein_coding Danio_rerio 3e-35 154
ENST00000393265 SLC24A4-003 protein_coding Homo_sapiens 0 1258
ENST00000525557 SLC24A4-007 protein_coding Homo_sapiens 0 1611
ENST00000526482 SLC24A4-005 retained_intron Homo_sapiens 0 1258
ENST00000531433 SLC24A4-002 protein_coding Homo_sapiens 0 2242
ENST00000532405 SLC24A4-001 protein_coding Homo_sapiens 0 1258
ENST00000554925 SLC24A4-008 retained_intron Homo_sapiens 0 1258

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