C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sp140 nuclear body protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161497 Sp140-004 ENSMUSG00000070031 10090 + 1:85632478-85644942 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleOvaryTestisENSMUST00000161497
Transcript ID Brain Heart Kidney Muscle Ovary Testis
ENSMUST00000161497 0.589±0.00 0.593±0.17 0.676±0.00 0.168±0.00 0.917±0.29 0.096±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AU CIL_0004AU_0008 CGP 1:85576899-85645037
CIL_0004AU CIL_0004AU_0007 CGP 1:85600378-85709998

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243810 SP140L-201 protein_coding Homo_sapiens 1e-21 110
ENST00000343805 SP140-009 protein_coding Homo_sapiens 5e-25 121
ENST00000392045 SP140-002 protein_coding Homo_sapiens 6e-25 121
ENST00000396563 SP140L-202 protein_coding Homo_sapiens 9e-22 110
ENST00000415673 SP140L-009 protein_coding Homo_sapiens 1e-21 110
ENST00000417495 SP140-004 protein_coding Homo_sapiens 5e-25 121
ENST00000420434 SP140-201 protein_coding Homo_sapiens 6e-25 121
ENST00000483728 SP140L-002 retained_intron Homo_sapiens 1e-21 110
ENST00000497212 SP140L-007 retained_intron Homo_sapiens 5e-20 102

Loading