C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SP140 nuclear body protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497212 SP140L-007 ENSG00000185404 9606 + 2:230401131-230402888 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AU CIL_0004AU_0002 CGP 2:230203110-230403732
CIL_0004AU CIL_0004AU_0004 CGP 2:230327184-230544090

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160010 Gm7281-001 unprocessed_pseudogene Mus_musculus 8.00141e-43 178
ENSMUST00000189121 RP23-6O16.1-001 unprocessed_pseudogene Mus_musculus 5e-35 152
ENSMUST00000072767 Arhgef12-201 protein_coding Mus_musculus 5e-35 152
ENSMUST00000165665 Arhgef12-202 protein_coding Mus_musculus 5e-35 152
ENSMUST00000160119 Sp140-006 retained_intron Mus_musculus 5e-35 152
ENSMUST00000080204 Sp140-001 protein_coding Mus_musculus 5e-35 152
ENSMUST00000162896 Gm6264-001 transcribed_unprocessed_pseudogene Mus_musculus 5e-30 135
ENSMUST00000160487 Gm2389-001 unprocessed_pseudogene Mus_musculus 2e-24 117
ENSMUST00000161497 Sp140-004 protein_coding Mus_musculus 5e-20 102
ENSMUST00000186987 RP23-76P9.2-001 unprocessed_pseudogene Mus_musculus 2e-18 97

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