C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161856 Rbm20-002 ENSMUSG00000043639 10090 + 19:53843210-53867080 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000161856
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000161856 0.163±0.00 0.372±0.13 0.597±0.00 1.369±0.00 0.300±0.00 0.287±0.08 1.114±0.14 1.388±0.94 0.161±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q9 CIL_0008Q9_0002 VISTA 19:53415569-54017446
CIL_0006FC CIL_0006FC_0002 CGP 19:53600398-53867080
CIL_0000UM CIL_0000UM_0002 CGP 19:53677306-53929861

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369519 RBM20-001 protein_coding Homo_sapiens 0 896
ENST00000471172 RBM20-006 processed_transcript Homo_sapiens 0 231
ENST00000480343 RBM20-007 processed_transcript Homo_sapiens 0 254

Loading