C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type XXII, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162081 Col22a1-002 ENSMUSG00000079022 10090 - 15:71904728-71954374 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryPlacentaENSMUST00000162081
Transcript ID Liver Ovary Placenta
ENSMUST00000162081 0.006±0.00 0.191±0.00 0.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PS CIL_0004PS_0002 CGP 15:71445678-72034227
CIL_0004PZ CIL_0004PZ_0002 CGP 15:71795795-72546279

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303045 COL22A1-001 protein_coding Homo_sapiens 0 817
ENST00000341807 COL22A1-003 processed_transcript Homo_sapiens 0 213
ENST00000435777 COL22A1-201 protein_coding Homo_sapiens 0 531

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