C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15796
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162135 Gm15796-001 ENSMUSG00000089646 10090 + 5:38507463-38507666 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENSMUST00000162135
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000162135 9.650±3.59 0.492±0.00 6.275±0.00 10.442±8.17 3.718±0.00 1.153±0.00 0.876±0.28 2.625±0.00 8.162±1.04 3.917±3.08 5.953±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UW CIL_0008UW_0002 VISTA 5:38299839-38905514

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309268 EEF1A1-009 protein_coding Homo_sapiens 0 278
ENST00000316292 EEF1A1-001 protein_coding Homo_sapiens 0 278
ENST00000331523 EEF1A1-004 protein_coding Homo_sapiens 0 278
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 255
ENST00000419025 EEF1A1P8-001 processed_pseudogene Homo_sapiens 0 228
ENST00000429983 EEF1A1P27-001 processed_pseudogene Homo_sapiens 4.99997e-41 172
ENST00000434005 EEF1A1P6-001 processed_pseudogene Homo_sapiens 0 270
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 278
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 267
ENST00000490569 EEF1A1-008 retained_intron Homo_sapiens 0 278
ENST00000495704 EEF1A1P25-001 processed_pseudogene Homo_sapiens 0 248
ENST00000513637 EEF1A1P19-001 processed_pseudogene Homo_sapiens 0 252
ENST00000514975 EEF1A1P9-001 processed_pseudogene Homo_sapiens 0 252
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 250
ENST00000610520 EEF1A1-201 protein_coding Homo_sapiens 0 278
ENST00000615060 EEF1A1-202 protein_coding Homo_sapiens 0 265

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