C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436459 EEF1A1P5-001 ENSG00000196205 9606 + 9:133019486-133020874 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000436459
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000436459 0.716±0.00 0.621±0.00 2.173±0.00 1.733±1.44 3.382±2.68 2.226±1.32 0.503±0.37 1.951±1.05 2.060±1.94 2.415±1.67 0.198±0.02 4.236±4.68 0.815±0.23 0.442±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1929
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1794
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1783
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1690
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1613
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1587
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1491
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 1158
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 1110
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 1074
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 913
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 798
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 725
ENSMUST00000189839 RP24-342F15.1-001 processed_pseudogene Mus_musculus 0 719
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 599
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 590
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 486
ENSMUST00000162135 Gm15796-001 processed_pseudogene Mus_musculus 0 278

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