C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514975 EEF1A1P9-001 ENSG00000249264 9606 + 4:105484698-105486080 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000514975
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000514975 3.722±0.00 2.562±0.00 0.818±0.76 1.300±1.17 2.388±2.33 0.386±0.00 2.638±0.00 0.267±0.23 1.254±1.03 0.671±0.00 0.591±0.21 0.403±0.14 2.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006P5 CIL_0006P5_0002 CGP 4:105369077-105708093

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1825
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1712
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1701
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1624
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1498
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1489
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1419
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 1027
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 990
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 835
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 0 822
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 732
ENSMUST00000189839 RP24-342F15.1-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 680
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 590
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 466
ENSMUST00000162135 Gm15796-001 processed_pseudogene Mus_musculus 0 252

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