C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429983 EEF1A1P27-001 ENSG00000179460 9606 + 7:20582072-20583206 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastLungMuscleTestisENST00000429983
Transcript ID Adipose Adrenal Breast Lung Muscle Testis
ENST00000429983 0.011±0.00 0.012±0.00 0.024±0.00 0.022±0.00 0.020±0.00 0.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UH CIL_0007UH_0001 VISTA 7:20489771-21090788
CIL_0007YM CIL_0007YM_0001 VISTA 7:20493009-21094283
CIL_0007Z1 CIL_0007Z1_0001 VISTA 7:20499224-21100776

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 835
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 375
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 355
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 335
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 316
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 311
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 211
ENSMUST00000162135 Gm15796-001 processed_pseudogene Mus_musculus 4.99997e-41 172
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 5e-31 139

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