C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415278 EEF1A1P11-001 ENSG00000228502 9606 + 1:96446930-96448318 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000415278
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000415278 1.119±0.00 0.876±0.00 0.040±0.00 0.213±0.07 0.666±0.22 0.599±0.51 0.081±0.00 0.413±0.17 0.312±0.16 0.416±0.20 0.346±0.00 0.612±0.35 0.693±0.55 0.428±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J2 CIL_0007J2_0001 UCNEbase 1:95311769-97837577

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1807
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1683
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1666
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1591
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1485
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1448
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1413
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 1048
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 1027
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 990
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 0 839
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 835
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 730
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 669
ENSMUST00000189839 RP24-342F15.1-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 573
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 538
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 470
ENSMUST00000162135 Gm15796-001 processed_pseudogene Mus_musculus 0 255

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