C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162159 Lrrc9-001 ENSMUSG00000021090 10090 + 12:72441866-72510565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverMuscleOvaryTestisENSMUST00000162159
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000162159 0.084±0.00 0.136±0.00 0.012±0.00 0.262±0.13 0.025±0.01 0.033±0.01 0.016±0.01 0.006±0.00 0.343±0.15 13.716±1.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZY CIL_0005ZY_0003 CGP 12:72211752-72514334
CIL_000606 CIL_000606_0003 CGP 12:72441866-72580213

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254271 LRRC9-002 nonsense_mediated_decay Homo_sapiens 0 3504
ENST00000445360 LRRC9-001 protein_coding Homo_sapiens 0 3620
ENST00000568404 LRRC9-003 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000570145 LRRC9-005 protein_coding Homo_sapiens 0 488

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