C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162179 Lrrc9-003 ENSMUSG00000021090 10090 + 12:72441949-72467526 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartLiverMusclePlacentaENSMUST00000162179
Transcript ID Adrenal Heart Liver Muscle Placenta
ENSMUST00000162179 0.065±0.00 0.017±0.00 0.025±0.01 0.018±0.00 0.068±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZY CIL_0005ZY_0003 CGP 12:72211752-72514334
CIL_000606 CIL_000606_0003 CGP 12:72441866-72580213

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254271 LRRC9-002 nonsense_mediated_decay Homo_sapiens 0 1397
ENST00000445360 LRRC9-001 protein_coding Homo_sapiens 0 1397
ENST00000570145 LRRC9-005 protein_coding Homo_sapiens 0 488

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