C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 55b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162935 Tmem55b-008 ENSMUSG00000035953 10090 - 14:50929258-50930838 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryENSMUST00000162935
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000162935 58.142±17.00 35.894±8.07 21.853±7.94 14.339±0.00 9.914±0.68 20.039±3.98 24.589±7.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z3 CIL_0004Z3_0003 CGP 14:50906478-50927139
CIL_0001O8 CIL_0001O8_0002 CGP 14:50924968-50930856
CIL_0001O9 CIL_0001O9_0002 CGP 14:50926070-50965237

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250489 TMEM55B-001 protein_coding Homo_sapiens 0 542
ENST00000398020 TMEM55B-003 protein_coding Homo_sapiens 0 444
ENST00000554028 TMEM55B-005 protein_coding Homo_sapiens 2e-25 121
ENST00000556093 TMEM55B-004 protein_coding Homo_sapiens 0 298
ENST00000557041 TMEM55B-002 retained_intron Homo_sapiens 0 265

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