C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000AZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167984-ENSG00000188827 CGP 9606 16:3539033-3611598
GeneTranscriptPositionBiotype
ENSG00000103351 (CLUAP1)
clusterin associated protein 1 		ENST00000341633 (CLUAP1-002) 3501012-3536559 protein_coding
ENST00000571025 (CLUAP1-003) 3501018-3536825 protein_coding
ENST00000572600 (CLUAP1-004) 3509894-3537669 protein_coding
ENST00000572632 (CLUAP1-011) 3519969-3536470 nonsense_mediated_decay
ENST00000573370 (CLUAP1-005) 3500976-3515551 nonsense_mediated_decay
ENST00000574369 (CLUAP1-007) 3500981-3523229 protein_coding
ENST00000574551 (CLUAP1-010) 3515376-3530590 protein_coding
ENST00000574592 (CLUAP1-006) 3500982-3523196 nonsense_mediated_decay
ENST00000575134 (CLUAP1-008) 3501007-3530609 nonsense_mediated_decay
ENST00000575323 (CLUAP1-012) 3530462-3533111 retained_intron
ENST00000576117 (CLUAP1-009) 3502044-3508464 protein_coding
ENST00000576634 (CLUAP1-001) 3500924-3539048 protein_coding
ENSG00000188827 (SLX4)
SLX4 structure-specific endonuclease subunit 		ENST00000294008 (SLX4-001) 3581181-3611598 protein_coding
ENST00000466154 (SLX4-003) 3595611-3609259 retained_intron
ENST00000486524 (SLX4-002) 3600621-3611585 retained_intron
ENSG00000261938 (RP11-461A8.1)
 ENST00000573982 (RP11-461A8.1-001) 3581181-3583266 lincRNA
CIL_0000AZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049871-ENSMUSG00000039738 CGP 10090 16:3945007-4003770
GeneTranscriptPositionBiotype
ENSMUSG00000039738 (Slx4)
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) 		ENSMUST00000040790 (Slx4-001) 3979123-4001680 protein_coding
ENSMUST00000128980 (Slx4-004) 3979128-3985519 retained_intron
ENSMUST00000145706 (Slx4-005) 3979133-3982204 retained_intron
ENSMUST00000146569 (Slx4-003) 3979105-3989106 nonsense_mediated_decay
ENSMUST00000156542 (Slx4-002) 3979124-3995718 nonsense_mediated_decay
ENSMUST00000165830 (Slx4-006) 3994768-4001252 protein_coding
ENSMUST00000171658 (Slx4-008) 4001201-4003752 protein_coding
ENSMUST00000171762 (Slx4-007) 4001003-4003770 protein_coding
ENSMUSG00000049871 (Nlrc3)
NLR family, CARD domain containing 3 		ENSMUST00000096308 (Nlrc3-002) 3948870-3976632 retained_intron
ENSMUST00000163478 (Nlrc3-003) 3948879-3964207 retained_intron
ENSMUST00000177551 (Nlrc3-004) 3945610-3976632 protein_coding
ENSMUST00000180200 (Nlrc3-001) 3945007-3976545 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AZ_0001ENSG00000103351ENST00000341633ENST00000571025ENST00000572600ENST00000572632ENST00000573370ENST00000574369ENST00000574551ENST00000574592ENST00000575134ENST00000575323ENST00000576117ENST00000576634ENSG00000188827ENST00000294008ENST00000466154ENST00000486524ENSG00000261938ENST00000573982CIL_0000AZ_0002ENSMUSG00000039738ENSMUST00000040790ENSMUST00000128980ENSMUST00000145706ENSMUST00000146569ENSMUST00000156542ENSMUST00000165830ENSMUST00000171658ENSMUST00000171762ENSMUSG00000049871ENSMUST00000096308ENSMUST00000163478ENSMUST00000177551ENSMUST00000180200
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AZ_0001ENSG00000103351ENST00000341633ENST00000572600ENST00000572632ENST00000574369ENST00000574592ENST00000576634ENSG00000188827ENST00000294008ENST00000466154ENST00000486524ENSG00000261938ENST00000573982CIL_0000AZ_0002ENSMUSG00000039738ENSMUST00000040790ENSMUST00000128980ENSMUST00000145706ENSMUST00000146569ENSMUST00000156542ENSMUST00000171762ENSMUSG00000049871ENSMUST00000096308ENSMUST00000163478ENSMUST00000177551ENSMUST00000180200
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103351 ENST00000341633 N/A N/A N/A 11.609±3.76 N/A N/A N/A N/A N/A N/A N/A 8.199±0.00 N/A 40.074±7.97
ENST00000571025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572600 N/A N/A 3.346±0.00 N/A N/A N/A N/A N/A 4.761±0.00 N/A 3.332±0.00 N/A 5.223±0.00 N/A
ENST00000572632 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.828±0.00 N/A N/A N/A N/A
ENST00000573370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.077±0.00 135.898±0.00
ENST00000574551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574592 N/A N/A N/A N/A N/A N/A N/A 4.907±0.00 N/A N/A N/A N/A N/A N/A
ENST00000575134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576634 3.170±0.00 5.618±0.00 N/A 2.244±0.00 1.898±0.00 5.240±0.59 1.746±0.73 N/A 2.959±0.00 3.110±1.15 0.916±0.00 5.198±1.55 N/A N/A
ENSG00000188827 ENST00000294008 1.015±0.00 1.069±0.00 0.366±0.00 1.349±0.00 0.455±0.29 0.585±0.00 0.242±0.19 0.473±0.39 0.407±0.00 0.380±0.12 0.344±0.19 0.814±0.15 0.687±0.33 7.918±2.54
ENST00000466154 N/A N/A N/A 0.158±0.00 N/A 0.318±0.00 N/A 0.114±0.00 N/A N/A N/A 0.463±0.00 N/A N/A
ENST00000486524 N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A 0.560±0.00 0.396±0.00 0.090±0.00 N/A N/A N/A
ENSG00000261938 ENST00000573982 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.559±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039738 ENSMUST00000040790 N/A N/A N/A 5.437±2.47 N/A N/A N/A 1.289±0.00 0.603±0.49 N/A 0.905±0.61 1.254±0.36 0.676±0.00 10.053±0.00
ENSMUST00000128980 N/A 1.603±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145706 1.659±0.66 2.738±0.35 2.209±0.64 4.388±1.11 3.639±0.51 2.859±0.68 0.582±0.04 4.750±1.47 2.455±1.57 2.255±0.46 0.522±0.00 3.563±0.74 2.835±0.51 22.653±2.69
ENSMUST00000146569 0.993±0.40 1.188±0.19 N/A 1.671±0.51 1.636±0.59 0.680±0.00 0.496±0.11 2.300±0.55 0.425±0.23 1.083±0.00 0.442±0.00 2.386±0.68 1.685±0.66 7.462±1.42
ENSMUST00000156542 1.498±0.69 2.407±0.38 0.506±0.00 4.867±2.75 1.632±0.52 1.232±0.66 N/A 3.073±1.27 0.813±0.60 1.377±0.57 0.357±0.18 3.072±1.07 2.953±1.62 15.686±1.10
ENSMUST00000165830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171762 N/A N/A N/A 4.170±0.00 N/A N/A N/A N/A N/A N/A 2.209±0.00 N/A 7.897±1.14 34.815±0.00
ENSMUSG00000049871 ENSMUST00000096308 N/A N/A N/A N/A 1.228±0.00 N/A N/A N/A 0.075±0.00 N/A N/A 0.450±0.12 0.115±0.00 N/A
ENSMUST00000163478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.07 0.373±0.18 N/A
ENSMUST00000177551 0.302±0.15 0.854±0.14 0.130±0.00 0.248±0.01 4.162±1.29 0.402±0.15 0.281±0.07 0.447±0.09 0.105±0.05 0.738±0.19 0.242±0.10 0.464±0.18 0.476±0.50 0.099±0.02
ENSMUST00000180200 0.237±0.06 3.254±1.41 0.173±0.00 0.785±0.03 3.064±1.68 0.678±0.00 0.383±0.22 0.378±0.09 0.208±0.14 0.557±0.06 0.862±0.37 3.084±1.93 0.777±0.26 0.388±0.25

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