C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | NLR family, CARD domain containing 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000615877  |
NLRC3-002 |
ENSG00000167984 |
9606 | - |
16:3539038-3577400  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005EX | CIL_0005EX_0001 | CGP | 16:3493484-3539048 |
| CIL_0001DL | CIL_0001DL_0001 | CGP | 16:3500924-3577400 |
| CIL_0000AZ | CIL_0000AZ_0001 | CGP | 16:3539033-3611598 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005524 | IEA | ATP binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0007249 | IDA | I-kappaB kinase/NF-kappaB signaling |
| GO:0032088 | IDA | negative regulation of NF-kappaB transcription factor activity |
| GO:0042110 | IEP | T cell activation |
| GO:0043124 | IMP | negative regulation of I-kappaB kinase/NF-kappaB signaling |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000177551
|
Nlrc3-004 | protein_coding | Mus_musculus | 0 | 1724 |
|
ENSMUST00000096308
|
Nlrc3-002 | retained_intron | Mus_musculus | 0 | 1467 |
|
ENSMUST00000180200
|
Nlrc3-001 | protein_coding | Mus_musculus | 0 | 904 |
|
ENSMUST00000163478
|
Nlrc3-003 | retained_intron | Mus_musculus | 0 | 614 |
|
ENSMUST00000147797
|
Nol9-003 | processed_transcript | Mus_musculus | 0.00000002 | 68 |
