C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: pumilio RNA-binding family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163730 Pum2-014 ENSMUSG00000020594 10090 + 12:8674765-8713399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000163730
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000163730 51.734±0.00 46.731±0.00 37.332±0.40 15.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PO CIL_0008PO_0002 VISTA 12:8085675-8687404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IDA RNA binding
GO:0010494 IDA cytoplasmic stress granule
GO:0034063 IDA stress granule assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319801 PUM2-201 protein_coding Homo_sapiens 0 835
ENST00000338086 PUM2-001 protein_coding Homo_sapiens 0 961
ENST00000361078 PUM2-202 protein_coding Homo_sapiens 0 640
ENST00000403432 PUM2-002 protein_coding Homo_sapiens 0 961
ENST00000420234 PUM2-007 processed_transcript Homo_sapiens 0 621
ENST00000424110 PUM2-009 protein_coding Homo_sapiens 0 226
ENST00000429419 PUM2-008 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000432105 PUM2-005 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000440577 PUM2-003 protein_coding Homo_sapiens 0 374
ENST00000442400 PUM2-006 protein_coding Homo_sapiens 0 961
ENST00000446940 PUM2-004 nonsense_mediated_decay Homo_sapiens 0 390

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