C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine VI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163767 Cpne6-005 ENSMUSG00000022212 10090 + 14:55511360-55517431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENSMUST00000163767
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENSMUST00000163767 0.600±0.00 19.571±26.90 0.028±0.00 0.058±0.00 0.020±0.00 0.040±0.01 0.004±0.00 0.037±0.01 0.138±0.05 0.041±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031H CIL_00031H_0002 CGP 14:55491093-55517431
CIL_0003F9 CIL_0003F9_0002 CGP 14:55510445-55524981

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 IDA phosphatidylserine binding
GO:0008150 ND biological_process
GO:0016020 IDA membrane
GO:0030424 IDA axon
GO:0030425 IDA dendrite

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397016 CPNE6-003 protein_coding Homo_sapiens 0 2289
ENST00000460657 CPNE6-002 retained_intron Homo_sapiens 0 704
ENST00000537691 CPNE6-201 protein_coding Homo_sapiens 0 2289
ENST00000557829 CPNE6-006 retained_intron Homo_sapiens 0 427
ENST00000557889 CPNE6-017 protein_coding Homo_sapiens 0 200
ENST00000558450 CPNE6-014 protein_coding Homo_sapiens 0 529
ENST00000558541 CPNE6-018 protein_coding Homo_sapiens 0 878
ENST00000558795 CPNE6-005 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000558859 CPNE6-011 protein_coding Homo_sapiens 0 353
ENST00000558995 CPNE6-004 retained_intron Homo_sapiens 0 1724
ENST00000559197 CPNE6-019 protein_coding Homo_sapiens 0 536
ENST00000559207 CPNE6-013 protein_coding Homo_sapiens 0 699
ENST00000559778 CPNE6-016 protein_coding Homo_sapiens 0 401
ENST00000560092 CPNE6-008 processed_transcript Homo_sapiens 0 353
ENST00000560356 CPNE6-015 protein_coding Homo_sapiens 0 568
ENST00000560761 CPNE6-010 protein_coding Homo_sapiens 0 599
ENST00000560828 CPNE6-009 protein_coding Homo_sapiens 0 568
ENST00000560845 CPNE6-007 retained_intron Homo_sapiens 0 435
ENST00000560884 CPNE6-012 protein_coding Homo_sapiens 0 568

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